RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA293022" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA293022 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9301333 9301333 PRJNA293022_P_NODE_33928_length_240_cov_1.816754_g33191_i0 PRJNA293022 33928 240 1.816754 4.3602096 Sopawol virus 3131668 Viruses Viruses 206 1.57e-48   NTclustered gi|2717323098|gb|PP173969.1| 3131668 g33191 i0 89.157 150.783333333333 166 16 69 2 3 167 216 380 MAG: Sopawol virus isolate SP1B_k141_158324 genomic sequence blastn 36188 206 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Sopawol virus
18225087 18225087 PRJNA293022_P_NODE_67635_length_169_cov_0.866667_g66898_i0 PRJNA293022 67635 169 0.866667 1.46466723 Ripachij virus 3130407 Viruses Viruses 213 6.12e-51   NTclustered gi|2717319663|gb|PP172709.1| 3130407 g66898 i0 90.361 12.1420118343195 166 11 96 5 1 163 480 643 MAG: Ripachij virus isolate KCAP1_k141_392510 genomic sequence blastn 2052 213 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripachij virus
18225103 18225103 PRJNA293022_P_NODE_69595_length_168_cov_0.873950_g68858_i0 PRJNA293022 69595 168 0.87395 1.468236 Chrocagosk virus 3129397 Viruses Viruses 87.9 3.87e-13   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g68858 i0 80.87 0.68452380952381 115 18 67 3 3 114 582 469 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 115 87.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;