RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA293022" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA293022 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13127109 13127109 PRJNA293022_P_NODE_42911_length_213_cov_1.554878_g42174_i0 PRJNA293022 42911 213 1.554878 3.31189014 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 250 6.19e-62   NTclustered gi|563351663|gb|CP006913.1| 1394709 g42174 i0 88.208 123.957746478873 212 22 99 3 1 210 125567 125357 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 26403 250 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
18224876 18224876 PRJNA293022_P_NODE_2155_length_904_cov_3.389474_g1719_i0 PRJNA293022 2155 904 3.389474 30.64084496 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 625 4.289999999999999e-174   NTclustered gi|563351663|gb|CP006913.1| 1394709 g1719 i0 79.665 101.648230088496 895 161 98 20 11 895 125802 126685 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 91890 625 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
19499104 19499104 PRJNA293022_P_NODE_22536_length_299_cov_2.252000_g21799_i0 PRJNA293022 22536 299 2.252 6.73348 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 322 1.92e-83   NTclustered gi|563351663|gb|CP006913.1| 1394709 g21799 i0 86.851 5.32775919732441 289 36 96 2 4 290 126918 127206 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 1593 322 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;