RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA289590" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA289590 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23324821 23324821 PRJNA289590_P_NODE_5199_length_432_cov_2.026110_g4975_i0 PRJNA289590 5199 432 2.02611 8.7527952 Sedimentisphaerales bacterium 2813034 Bacteria Bacteria 54.7 0.012   NTclustered gi|2621703756|emb|OY762711.1| 2813034 g4975 i0 94.286 0.0810185185185185 35 2 8 0 25 59 3671457 3671423 MAG: Sedimentisphaerales bacterium isolate 370b4a7f-3155-49ac-97a8-084c2d75e38e genome assembly, chromosome: 1 blastn 35 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Sedimentisphaerales     Sedimentisphaerales bacterium
25285525 25285525 PRJNA289590_P_NODE_29660_length_164_cov_0.904348_g29436_i0 PRJNA289590 29660 164 0.904348 1.48313072 Engelhardtia 139931 Bacteria Bacteria 195 2.15e-45   NTclustered gi|1712638177|gb|CP036287.1| 2528011 g29436 i0 90.604 160.975609756098 149 10 90 4 1 147 5247535 5247389 Planctomycetes bacterium Pla133 chromosome, complete genome blastn 26400 195 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia     Engelhardtia Engelhardtia mirabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;