contig_metadata
55 rows where analysis = "blastn", bioproject = "PRJNA287283" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 372204 | 372204 | PRJNA287283_P_NODE_10121_length_176_cov_0.910569_g9897_i0 | PRJNA287283 | 10121 | 176 | 0.910569 | 1.60260144 | Hyphomicrobium sp. ghe19 | 2682968 | Bacteria | Bacteria | 320 | 3.69e-83 | NTclustered | gi|1800674788|emb|LR743509.1| | 2682968 | g9897 | i0 | 99.432 | 195.522727272727 | 176 | 1 | 100 | 0 | 1 | 176 | 1751259 | 1751434 | Hyphomicrobium sp. ghe19 isolate hypp genome assembly, chromosome: 1 | blastn | 34412 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiaceae | Hyphomicrobium | Hyphomicrobium sp. ghe19 | ||
| 372216 | 372216 | PRJNA287283_P_NODE_9261_length_180_cov_0.874016_g9037_i0 | PRJNA287283 | 9261 | 180 | 0.874016 | 1.5732288 | Sphingomonas psychrotolerans | 1327635 | Bacteria | Bacteria | 113 | 6.910000000000001e-21 | NTclustered | gi|1280029430|gb|CP024923.1| | 1327635 | g9037 | i0 | 87.879 | 2.78333333333333 | 99 | 8 | 54 | 4 | 3 | 99 | 2716874 | 2716970 | Sphingomonas psychrotolerans strain Cra20 chromosome, complete genome | blastn | 501 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas psychrotolerans | ||
| 1059231 | 1059231 | PRJNA287283_P_NODE_7381_length_200_cov_2.285714_g7157_i0 | PRJNA287283 | 7381 | 200 | 2.285714 | 4.571428 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 364 | 1.96e-96 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g7157 | i0 | 99.5 | 100 | 200 | 1 | 100 | 0 | 1 | 200 | 33757 | 33558 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20000 | 364 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1646952 | 1646952 | PRJNA287283_P_NODE_7902_length_190_cov_2.364964_g7678_i0 | PRJNA287283 | 7902 | 190 | 2.364964 | 4.4934316 | Sphaerotilus sulfidivorans | 639200 | Bacteria | Bacteria | 351 | 1.4399999999999997e-92 | NTclustered | gi|1735504366|gb|CP035708.1| | 639200 | g7678 | i0 | 100 | 376.705263157895 | 190 | 0 | 100 | 0 | 1 | 190 | 3972487 | 3972676 | Sphaerotilus sulfidivorans strain D-507 chromosome, complete genome | blastn | 71574 | 351 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Sphaerotilus | Sphaerotilus sulfidivorans | ||
| 2334433 | 2334433 | PRJNA287283_P_NODE_3562_length_337_cov_1.644366_g3338_i0 | PRJNA287283 | 3562 | 337 | 1.644366 | 5.54151342 | Pasteurellaceae | 712 | Bacteria | Bacteria | 298 | 3.7e-76 | NTclustered | gi|1438629556|gb|CP031240.1| | 726 | g3338 | i0 | 100 | 449.896142433234 | 161 | 0 | 82 | 0 | 177 | 337 | 113628 | 113788 | Haemophilus haemolyticus strain M19345 chromosome, complete genome | blastn | 151615 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus haemolyticus | ||
| 2334434 | 2334434 | PRJNA287283_P_NODE_4842_length_276_cov_4.713004_g4618_i0 | PRJNA287283 | 4842 | 276 | 4.713004 | 13.00789104 | Acidovorax | 12916 | Bacteria | Bacteria | 505 | 1.62e-138 | NTclustered | gi|1004607049|gb|KT865757.1| | 12917 | g4618 | i0 | 99.638 | 300.282608695652 | 276 | 1 | 100 | 0 | 1 | 276 | 439 | 164 | Acidovorax facilis strain DSM 649 23S ribosomal RNA gene, partial sequence | blastn | 82878 | 510 | 0.990196078431373 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax facilis | ||
| 2334436 | 2334436 | PRJNA287283_P_NODE_7622_length_195_cov_2.161972_g7398_i0 | PRJNA287283 | 7622 | 195 | 2.161972 | 4.2158454 | Lysobacteraceae | 32033 | Bacteria | Bacteria | 339 | 1.15e-88 | NTclustered | gi|2020029385|dbj|AP024546.1| | 2675059 | g7398 | i0 | 97.949 | 192 | 195 | 4 | 100 | 0 | 1 | 195 | 1475004 | 1474810 | Lysobacter helvus D10 DNA, complete genome | blastn | 37440 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Lysobacter | Lysobacter helvus | ||
| 2334439 | 2334439 | PRJNA287283_P_NODE_9902_length_177_cov_0.903226_g9678_i0 | PRJNA287283 | 9902 | 177 | 0.903226 | 1.59871002 | Escherichia | 561 | Bacteria | Bacteria | 327 | 2.2199999999999996e-85 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g9678 | i0 | 100 | 100 | 177 | 0 | 100 | 0 | 1 | 177 | 3896894 | 3896718 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 17700 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2922848 | 2922848 | PRJNA287283_P_NODE_10463_length_175_cov_0.918033_g10239_i0 | PRJNA287283 | 10463 | 175 | 0.918033 | 1.60655775 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 226 | 8.209999999999999e-55 | NTclustered | gi|2179571758|gb|CP045051.1| | 40214 | g10239 | i0 | 100 | 18.2914285714286 | 122 | 0 | 70 | 0 | 1 | 122 | 1538559 | 1538438 | Acinetobacter johnsonii strain AJ312 chromosome, complete genome | blastn | 3201 | 226 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 3609725 | 3609725 | PRJNA287283_P_NODE_3323_length_350_cov_11.488215_g3099_i0 | PRJNA287283 | 3323 | 350 | 11.488215 | 40.2087525 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3099 | i0 | 100 | 100.088571428571 | 350 | 0 | 100 | 0 | 1 | 350 | 985053 | 984704 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 35031 | 647 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3609726 | 3609726 | PRJNA287283_P_NODE_4483_length_293_cov_1.987500_g4259_i0 | PRJNA287283 | 4483 | 293 | 1.9875 | 5.823375 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 542 | 1.32e-149 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4259 | i0 | 100 | 100 | 293 | 0 | 100 | 0 | 1 | 293 | 1517921 | 1518213 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 29300 | 542 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3609727 | 3609727 | PRJNA287283_P_NODE_4963_length_271_cov_1.532110_g4739_i0 | PRJNA287283 | 4963 | 271 | 1.53211 | 4.1520181 | Neisseria | 482 | Bacteria | Bacteria | 501 | 2.05e-137 | NTclustered | gi|1633799129|gb|CP039886.1| | 484 | g4739 | i0 | 100 | 351.0036900369 | 271 | 0 | 100 | 0 | 1 | 271 | 126772 | 127042 | Neisseria flavescens strain ATCC 13120 chromosome, complete genome | blastn | 95122 | 501 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria flavescens | ||
| 4887134 | 4887134 | PRJNA287283_P_NODE_10044_length_176_cov_1.585366_g9820_i0 | PRJNA287283 | 10044 | 176 | 1.585366 | 2.79024416 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g9820 | i0 | 100 | 100 | 176 | 0 | 100 | 0 | 1 | 176 | 809735 | 809910 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 17600 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4887137 | 4887137 | PRJNA287283_P_NODE_7584_length_196_cov_1.538462_g7360_i0 | PRJNA287283 | 7584 | 196 | 1.538462 | 3.01538552 | Methylotenera | 359407 | Bacteria | Bacteria | 355 | 1.15e-93 | NTclustered | gi|507148291|ref|NR_103094.1| | 359408 | g7360 | i0 | 99.487 | 123.418367346939 | 195 | 1 | 99 | 0 | 1 | 195 | 2083 | 2277 | Methylotenera mobilis strain JLW8 23S ribosomal RNA gene, complete sequence | blastn | 24190 | 355 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylotenera | Methylotenera mobilis | ||
| 4887139 | 4887139 | PRJNA287283_P_NODE_8764_length_182_cov_0.868217_g8540_i0 | PRJNA287283 | 8764 | 182 | 0.868217 | 1.58015494 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 84.2 | 5.49e-12 | NTclustered | gi|1243045118|gb|MF589339.1| | 562 | g8540 | i0 | 97.917 | 64.7967032967033 | 48 | 1 | 26 | 0 | 133 | 180 | 61886 | 61933 | Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence | blastn | 11793 | 84.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 5475615 | 5475615 | PRJNA287283_P_NODE_9925_length_177_cov_0.903226_g9701_i0 | PRJNA287283 | 9925 | 177 | 0.903226 | 1.59871002 | Dyella sp. BiH032 | 3075430 | Bacteria | Bacteria | 126 | 8.69e-25 | NTclustered | gi|2581889107|gb|CP134867.1| | 3075430 | g9701 | i0 | 82.432 | 8.26553672316384 | 148 | 22 | 82 | 4 | 24 | 169 | 2272070 | 2272215 | Dyella sp. BiH032 chromosome, complete genome | blastn | 1463 | 126 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Rhodanobacteraceae | Dyella | Dyella sp. BiH032 | ||
| 6161988 | 6161988 | PRJNA287283_P_NODE_9105_length_180_cov_1.015748_g8881_i0 | PRJNA287283 | 9105 | 180 | 1.015748 | 1.8283464 | Rheinheimera | 67575 | Bacteria | Bacteria | 311 | 2.28e-80 | NTclustered | gi|975021511|gb|CP013656.1| | 1763998 | g8881 | i0 | 97.778 | 793.344444444444 | 180 | 4 | 100 | 0 | 1 | 180 | 417948 | 417769 | Rheinheimera sp. F8 genome | blastn | 142802 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. F8 | ||
| 6749881 | 6749881 | PRJNA287283_P_NODE_2526_length_412_cov_2.640669_g2302_i0 | PRJNA287283 | 2526 | 412 | 2.640669 | 10.87955628 | Comamonas sp. GB3 AK4-5 | 3231487 | Bacteria | Bacteria | 640 | 6.64e-179 | NTclustered | gi|2788732997|gb|CP166730.1| | 3231487 | g2302 | i0 | 94.699 | 535.199029126214 | 415 | 16 | 100 | 6 | 1 | 412 | 600211 | 600622 | Comamonas sp. GB3 AK4-5 chromosome, complete genome | blastn | 220502 | 640 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas sp. GB3 AK4-5 | ||
| 6749887 | 6749887 | PRJNA287283_P_NODE_7266_length_203_cov_1.120000_g7042_i0 | PRJNA287283 | 7266 | 203 | 1.12 | 2.2736 | Brachymonas wangyanguii | 3130163 | Bacteria | Bacteria | 309 | 9.51e-80 | NTclustered | gi|2858558014|gb|CP173677.1| | 3130163 | g7042 | i0 | 94.118 | 185.285714285714 | 204 | 10 | 100 | 2 | 1 | 203 | 395245 | 395447 | Brachymonas sp. G13 chromosome, complete genome | blastn | 37613 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Brachymonas | Brachymonas wangyanguii | ||
| 8711876 | 8711876 | PRJNA287283_P_NODE_7367_length_201_cov_0.763514_g7143_i0 | PRJNA287283 | 7367 | 201 | 0.763514 | 1.53466314 | Paracoccus | 265 | Bacteria | Bacteria | 313 | 7.2599999999999985e-81 | NTclustered | gi|1317217976|gb|CP025430.1| | 1077935 | g7143 | i0 | 96.316 | 158.562189054726 | 190 | 7 | 95 | 0 | 12 | 201 | 3023679 | 3023868 | Paracoccus zhejiangensis strain J6 chromosome, complete genome | blastn | 31871 | 315 | 0.993650793650794 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus zhejiangensis | ||
| 9987317 | 9987317 | PRJNA287283_P_NODE_7248_length_203_cov_1.433333_g7024_i0 | PRJNA287283 | 7248 | 203 | 1.433333 | 2.90966599 | Neisseriaceae | 481 | Bacteria | Bacteria | 370 | 4.3e-98 | NTclustered | gi|1633799129|gb|CP039886.1| | 484 | g7024 | i0 | 99.507 | 369.019704433498 | 203 | 1 | 100 | 0 | 1 | 203 | 126192 | 125990 | Neisseria flavescens strain ATCC 13120 chromosome, complete genome | blastn | 74911 | 370 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria flavescens | ||
| 9987318 | 9987318 | PRJNA287283_P_NODE_9648_length_178_cov_0.896000_g9424_i0 | PRJNA287283 | 9648 | 178 | 0.896 | 1.59488 | Escherichia | 561 | Bacteria | Bacteria | 324 | 2.89e-84 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g9424 | i0 | 99.438 | 100 | 178 | 1 | 100 | 0 | 1 | 178 | 497147 | 497324 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 17800 | 324 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10576122 | 10576122 | PRJNA287283_P_NODE_2269_length_439_cov_0.909326_g2046_i0 | PRJNA287283 | 2269 | 439 | 0.909326 | 3.9919411400000002 | Luteimonas sp. JM171 | 1896164 | Bacteria | Bacteria | 634 | 3.3099999999999995e-177 | NTclustered | gi|1060916168|gb|CP017074.1| | 1896164 | g2046 | i0 | 92.711 | 233.289293849658 | 439 | 32 | 100 | 0 | 1 | 439 | 1598672 | 1599110 | Luteimonas sp. JM171 genome | blastn | 102414 | 634 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Luteimonas | Luteimonas sp. JM171 | ||
| 11262372 | 11262372 | PRJNA287283_P_NODE_3909_length_320_cov_1.722846_g3685_i0 | PRJNA287283 | 3909 | 320 | 1.722846 | 5.5131072 | Ralstonia | 48736 | Bacteria | Bacteria | 553 | 6.749999999999998e-153 | NTclustered | gi|2828818|gb|AF012421.1|AF012421 | 329 | g3685 | i0 | 97.812 | 210.9375 | 320 | 7 | 100 | 0 | 1 | 320 | 1152 | 833 | Ralstonia pickettii strain PD1515 23S ribosomal RNA gene, partial sequence | blastn | 67500 | 553 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia pickettii | ||
| 11850839 | 11850839 | PRJNA287283_P_NODE_9930_length_177_cov_0.903226_g9706_i0 | PRJNA287283 | 9930 | 177 | 0.903226 | 1.59871002 | Cupriavidus neocaledonicus | 1040979 | Bacteria | Bacteria | 191 | 3.04e-44 | NTclustered | gi|1442883352|emb|LT984807.1| | 1040979 | g9706 | i0 | 87.73 | 75.2598870056497 | 163 | 20 | 92 | 0 | 1 | 163 | 381964 | 381802 | Cupriavidus neocaledonicus isolate Cupriavidus taiwanensis STM 6160 genome assembly, plasmid: II | blastn | 13321 | 191 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus neocaledonicus | ||
| 12537696 | 12537696 | PRJNA287283_P_NODE_5470_length_252_cov_1.211055_g5246_i0 | PRJNA287283 | 5470 | 252 | 1.211055 | 3.0518586 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 449 | 6.94e-122 | NTclustered | gi|2699374251|gb|CP147487.1| | 550 | g5246 | i0 | 98.81 | 329.079365079365 | 252 | 3 | 100 | 0 | 1 | 252 | 5415138 | 5414887 | Enterobacter cloacae strain FACU chromosome | blastn | 82928 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 13126018 | 13126018 | PRJNA287283_P_NODE_1271_length_631_cov_2.956747_g1062_i0 | PRJNA287283 | 1271 | 631 | 2.956747 | 18.65707357 | Massilia sp. WG5 | 1707785 | Bacteria | Bacteria | 545 | 2.36e-150 | NTclustered | gi|1384998881|gb|CP012640.2| | 1707785 | g1062 | i0 | 99.664 | 434.535657686212 | 298 | 1 | 92 | 0 | 1 | 298 | 4181081 | 4180784 | Massilia sp. WG5, complete sequence | blastn | 274192 | 545 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. WG5 | ||
| 13812572 | 13812572 | PRJNA287283_P_NODE_4631_length_286_cov_1.721030_g4407_i0 | PRJNA287283 | 4631 | 286 | 1.72103 | 4.9221458 | Vibrio | 662 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1830435238|gb|CP051109.1| | 663 | g4407 | i0 | 100 | 682.090909090909 | 286 | 0 | 100 | 0 | 1 | 286 | 1422744 | 1423029 | Vibrio alginolyticus strain 2015AW-0011 chromosome 1 | blastn | 195078 | 529 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio alginolyticus | ||
| 14401177 | 14401177 | PRJNA287283_P_NODE_9612_length_178_cov_0.896000_g9388_i0 | PRJNA287283 | 9612 | 178 | 0.896 | 1.59488 | Sphingomonas hankookensis | 563996 | Bacteria | Bacteria | 324 | 2.89e-84 | NTclustered | gi|2441333361|gb|CP117025.1| | 563996 | g9388 | i0 | 99.438 | 3.8876404494382 | 178 | 1 | 100 | 0 | 1 | 178 | 2175734 | 2175911 | Sphingomonas hankookensis strain SZ.B2R2 chromosome, complete genome | blastn | 692 | 324 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas hankookensis | ||
| 15674914 | 15674914 | PRJNA287283_P_NODE_6473_length_223_cov_0.900000_g6249_i0 | PRJNA287283 | 6473 | 223 | 0.9 | 2.007 | Thalassococcus sp. S3 | 2017482 | Bacteria | Bacteria | 305 | 1.38e-78 | NTclustered | gi|1577031754|gb|CP022303.1| | 2017482 | g6249 | i0 | 92.523 | 182.77130044843 | 214 | 14 | 96 | 2 | 1 | 213 | 4268540 | 4268752 | Thalassococcus sp. S3 chromosome, complete genome | blastn | 40758 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Thalassococcus | Thalassococcus sp. S3 | ||
| 16361655 | 16361655 | PRJNA287283_P_NODE_3413_length_345_cov_2.205479_g3189_i0 | PRJNA287283 | 3413 | 345 | 2.205479 | 7.60890255 | Aeromonas | 642 | Bacteria | Bacteria | 62.1 | 5.42e-5 | NTclustered | gi|2830880323|gb|CP170761.1| | 196024 | g3189 | i0 | 97.222 | 0.388405797101449 | 36 | 1 | 12 | 0 | 194 | 229 | 1308365 | 1308400 | Aeromonas dhakensis strain CWH5 chromosome, complete genome | blastn | 134 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas dhakensis | ||
| 16949582 | 16949582 | PRJNA287283_P_NODE_9954_length_177_cov_0.903226_g9730_i0 | PRJNA287283 | 9954 | 177 | 0.903226 | 1.59871002 | Agrilutibacter terrestris | 2865112 | Bacteria | Bacteria | 183 | 5.0799999999999996e-42 | NTclustered | gi|1899444021|gb|CP060820.1| | 2865112 | g9730 | i0 | 85.393 | 10.090395480226 | 178 | 24 | 100 | 2 | 1 | 177 | 1792351 | 1792527 | Agrilutibacter terrestris strain II4 chromosome, complete genome | blastn | 1786 | 183 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Agrilutibacter | Agrilutibacter terrestris | ||
| 17636809 | 17636809 | PRJNA287283_P_NODE_4114_length_309_cov_2.195312_g3890_i0 | PRJNA287283 | 4114 | 309 | 2.195312 | 6.78351408 | root | 1 | Root_unresolved | Root_unresolved | 78.7 | 4.76e-10 | NTclustered | gi|1315519809|gb|MF918372.1| | 573 | g3890 | i0 | 100 | 38.1294498381877 | 42 | 0 | 14 | 0 | 268 | 309 | 79032 | 78991 | Klebsiella pneumoniae plasmid p1512-KPC, complete sequence | blastn | 11782 | 78.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 17636814 | 17636814 | PRJNA287283_P_NODE_9414_length_179_cov_0.888889_g9190_i0 | PRJNA287283 | 9414 | 179 | 0.888889 | 1.59111131 | Comamonadaceae | 80864 | Bacteria | Bacteria | 171 | 4.01e-38 | NTclustered | gi|2288988666|gb|CP102931.1| | 34073 | g9190 | i0 | 84.393 | 5.49720670391061 | 173 | 27 | 97 | 0 | 7 | 179 | 5276248 | 5276420 | Variovorax paradoxus strain JBCE486 chromosome, complete genome | blastn | 984 | 171 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 18223841 | 18223841 | PRJNA287283_P_NODE_4555_length_289_cov_4.932203_g4331_i0 | PRJNA287283 | 4555 | 289 | 4.932203 | 14.25406667 | Pseudomonas protegens | 380021 | Bacteria | Bacteria | 453 | 6.28e-123 | NTclustered | gi|1149544984|gb|CP013184.1| | 380021 | g4331 | i0 | 94.613 | 559.681660899654 | 297 | 8 | 100 | 4 | 1 | 289 | 126828 | 127124 | Pseudomonas protegens strain H78, complete genome | blastn | 161748 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas protegens | ||
| 18910616 | 18910616 | PRJNA287283_P_NODE_10415_length_175_cov_0.918033_g10191_i0 | PRJNA287283 | 10415 | 175 | 0.918033 | 1.60655775 | Pseudomonadota | 1224 | Bacteria | Bacteria | 278 | 2.23e-70 | NTclustered | gi|2788821993|gb|CP166817.1| | 287 | g10191 | i0 | 95.402 | 104.411428571429 | 174 | 8 | 99 | 0 | 1 | 174 | 1317149 | 1316976 | Pseudomonas aeruginosa strain M7242404 chromosome, complete genome | blastn | 18272 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 18910619 | 18910619 | PRJNA287283_P_NODE_6135_length_232_cov_2.709497_g5911_i0 | PRJNA287283 | 6135 | 232 | 2.709497 | 6.28603304 | Acinetobacter | 469 | Bacteria | Bacteria | 429 | 8.2e-116 | NTclustered | gi|1723902757|gb|CP028800.2| | 40215 | g5911 | i0 | 100 | 601.862068965517 | 232 | 0 | 100 | 0 | 1 | 232 | 23718 | 23949 | Acinetobacter junii strain WCHAJ59 chromosome, complete genome | blastn | 139632 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter junii | ||
| 19498110 | 19498110 | PRJNA287283_P_NODE_3256_length_354_cov_2.335548_g3032_i0 | PRJNA287283 | 3256 | 354 | 2.335548 | 8.26783992 | Methylophilus sp. DW102 | 3095607 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|2631712142|dbj|AP029023.1| | 3095607 | g3032 | i0 | 100 | 225.251412429379 | 354 | 0 | 100 | 0 | 1 | 354 | 175167 | 174814 | Methylophilus sp. DW102 DNA, complete genome | blastn | 79739 | 654 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus sp. DW102 | ||
| 20185230 | 20185230 | PRJNA287283_P_NODE_2956_length_375_cov_1.850932_g2732_i0 | PRJNA287283 | 2956 | 375 | 1.850932 | 6.940995 | Psychrobacter | 497 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|1092191903|gb|CP012969.1| | 1720344 | g2732 | i0 | 99.2 | 357.968 | 375 | 3 | 100 | 0 | 1 | 375 | 2108435 | 2108809 | Psychrobacter sp. AntiMn-1 chromosome, complete genome | blastn | 134238 | 682 | 0.991202346041056 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. AntiMn-1 | ||
| 21460933 | 21460933 | PRJNA287283_P_NODE_2337_length_431_cov_12.354497_g2114_i0 | PRJNA287283 | 2337 | 431 | 12.354497 | 53.24788207 | Comamonadaceae | 80864 | Bacteria | Bacteria | 793 | 0 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g2114 | i0 | 100 | 317.287703016241 | 429 | 0 | 99 | 0 | 3 | 431 | 2503758 | 2503330 | Acidovorax temperans strain AA22 chromosome | blastn | 136751 | 793 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 21460936 | 21460936 | PRJNA287283_P_NODE_3977_length_317_cov_0.806818_g3753_i0 | PRJNA287283 | 3977 | 317 | 0.806818 | 2.55761306 | Methylophilus | 16 | Bacteria | Bacteria | 569 | 6.629999999999998e-158 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g3753 | i0 | 99.054 | 111.296529968454 | 317 | 3 | 100 | 0 | 1 | 317 | 2984310 | 2983994 | Methylophilus methylotrophus strain D22 chromosome | blastn | 35281 | 569 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 21460941 | 21460941 | PRJNA287283_P_NODE_8017_length_188_cov_3.081481_g7793_i0 | PRJNA287283 | 8017 | 188 | 3.081481 | 5.79318428 | Pseudomonas | 286 | Bacteria | Bacteria | 346 | 6.6e-91 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g7793 | i0 | 100 | 567.398936170213 | 187 | 0 | 99 | 0 | 1 | 187 | 9844 | 10030 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 106671 | 348 | 0.994252873563218 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 21460943 | 21460943 | PRJNA287283_P_NODE_9597_length_178_cov_0.896000_g9373_i0 | PRJNA287283 | 9597 | 178 | 0.896 | 1.59488 | root | 1 | Root_unresolved | Root_unresolved | 329 | 6.21e-86 | NTclustered | gi|1384665603|gb|MH053445.1| | 287 | g9373 | i0 | 100 | 101 | 178 | 0 | 100 | 0 | 1 | 178 | 19556 | 19379 | Pseudomonas aeruginosa strain PA1280 plasmid pICP-4GES, complete sequence | blastn | 17978 | 329 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 22048649 | 22048649 | PRJNA287283_P_NODE_9398_length_179_cov_0.888889_g9174_i0 | PRJNA287283 | 9398 | 179 | 0.888889 | 1.59111131 | Haemophilus parainfluenzae | 729 | Bacteria | Bacteria | 281 | 1.78e-71 | NTclustered | gi|2512930414|gb|CP125087.1| | 729 | g9174 | i0 | 94.972 | 37.7597765363128 | 179 | 9 | 100 | 0 | 1 | 179 | 379336 | 379158 | Haemophilus parainfluenzae strain EL1 chromosome, complete genome | blastn | 6759 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 22736012 | 22736012 | PRJNA287283_P_NODE_8458_length_183_cov_0.861538_g8234_i0 | PRJNA287283 | 8458 | 183 | 0.861538 | 1.57661454 | Acidovorax | 12916 | Bacteria | Bacteria | 281 | 1.83e-71 | NTclustered | gi|2442619374|gb|CP117193.1| | 80878 | g8234 | i0 | 94.972 | 42.5245901639344 | 179 | 9 | 98 | 0 | 1 | 179 | 828961 | 829139 | Acidovorax temperans strain LMJ chromosome, complete genome | blastn | 7782 | 283 | 0.992932862190813 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 22736013 | 22736013 | PRJNA287283_P_NODE_9318_length_179_cov_1.333333_g9094_i0 | PRJNA287283 | 9318 | 179 | 1.333333 | 2.38666607 | Escherichia | 561 | Bacteria | Bacteria | 320 | 3.76e-83 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g9094 | i0 | 98.883 | 100 | 179 | 2 | 100 | 0 | 1 | 179 | 4416341 | 4416519 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 17900 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22736015 | 22736015 | PRJNA287283_P_NODE_9878_length_177_cov_0.903226_g9654_i0 | PRJNA287283 | 9878 | 177 | 0.903226 | 1.59871002 | Pseudomonadota | 1224 | Bacteria | Bacteria | 99 | 1.89e-16 | NTclustered | gi|1972895586|gb|CP063166.1| | 34073 | g9654 | i0 | 93.846 | 41.9209039548023 | 65 | 4 | 37 | 0 | 113 | 177 | 1112246 | 1112182 | Variovorax paradoxus strain VAI-C chromosome, complete genome | blastn | 7420 | 99 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 23324218 | 23324218 | PRJNA287283_P_NODE_1999_length_475_cov_4.135071_g1777_i0 | PRJNA287283 | 1999 | 475 | 4.135071 | 19.64158725 | Massilia sp. UMI-21 | 1337838 | Bacteria | Bacteria | 822 | 0 | NTclustered | gi|1929479555|gb|CP063848.1| | 1337838 | g1777 | i0 | 97.895 | 535.938947368421 | 475 | 10 | 100 | 0 | 1 | 475 | 5259067 | 5259541 | Massilia sp. UMI-21 chromosome, complete genome | blastn | 254571 | 822 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. UMI-21 | ||
| 23324230 | 23324230 | PRJNA287283_P_NODE_9599_length_178_cov_0.896000_g9375_i0 | PRJNA287283 | 9599 | 178 | 0.896 | 1.59488 | Sinimarinibacterium sp. NLF-5-8 | 2698684 | Bacteria | Bacteria | 274 | 2.95e-69 | NTclustered | gi|1804087121|gb|CP048030.1| | 2698684 | g9375 | i0 | 94.444 | 187.342696629213 | 180 | 6 | 100 | 4 | 1 | 178 | 1433345 | 1433168 | Sinimarinibacterium sp. NLF-5-8 chromosome, complete genome | blastn | 33347 | 274 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Sinimarinibacterium | Sinimarinibacterium sp. NLF-5-8 | ||
| 24011105 | 24011105 | PRJNA287283_P_NODE_10639_length_170_cov_8.376068_g10415_i0 | PRJNA287283 | 10639 | 170 | 8.376068 | 14.2393156 | root | 1 | Root_unresolved | Root_unresolved | 309 | 7.64e-80 | NTclustered | gi|2706519156|gb|CP149578.1| | 287 | g10415 | i0 | 99.412 | 101 | 170 | 1 | 100 | 0 | 1 | 170 | 6007870 | 6008039 | Mutant Pseudomonas aeruginosa isolate FELIX_MS413, complete genome | blastn | 17170 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 24598302 | 24598302 | PRJNA287283_P_NODE_10260_length_176_cov_0.910569_g10036_i0 | PRJNA287283 | 10260 | 176 | 0.910569 | 1.60260144 | Sphingomonas panni | 237612 | Bacteria | Bacteria | 320 | 3.69e-83 | NTclustered | gi|2808875156|gb|PQ201171.1| | 237612 | g10036 | i0 | 99.432 | 1 | 176 | 1 | 100 | 0 | 1 | 176 | 15880 | 15705 | Sphingomonas panni strain E13 plasmid pSHE13.2, complete sequence | blastn | 176 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas panni | ||
| 25285254 | 25285254 | PRJNA287283_P_NODE_10640_length_170_cov_6.529915_g10416_i0 | PRJNA287283 | 10640 | 170 | 6.529915 | 11.1008555 | root | 1 | Root_unresolved | Root_unresolved | 315 | 1.64e-81 | NTclustered | gi|754557523|emb|LN794200.1| | 34071 | g10416 | i0 | 100 | 100 | 170 | 0 | 100 | 0 | 1 | 170 | 178 | 9 | Telluria mixta partial 16S rRNA gene, type strain DSM 29330T, clone 1 | blastn | 17000 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Telluria | Telluria mixta | ||
| 25285255 | 25285255 | PRJNA287283_P_NODE_10740_length_165_cov_2.250000_g10516_i0 | PRJNA287283 | 10740 | 165 | 2.25 | 3.7125 | Neisseria | 482 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|647544798|dbj|AB904066.1| | 33053 | g10516 | i0 | 100 | 100 | 165 | 0 | 100 | 0 | 1 | 165 | 683 | 519 | Neisseria perflava gene for 16S ribosomal RNA, partial sequence, strain: NSU-per_31 | blastn | 16500 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria perflava | ||
| 25285261 | 25285261 | PRJNA287283_P_NODE_6320_length_227_cov_1.339080_g6096_i0 | PRJNA287283 | 6320 | 227 | 1.33908 | 3.0397116 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 265 | 2.3899999999999997e-66 | NTclustered | gi|1573910300|gb|CP033381.1| | 107637 | g6096 | i0 | 87.946 | 292.885462555066 | 224 | 27 | 100 | 0 | 4 | 227 | 1651967 | 1651744 | Methylomonas sp. LW13 chromosome, complete genome | blastn | 66485 | 265 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Methylococcales | Methylococcaceae | Methylomonas | Methylomonas sp. LW13 | ||
| 25285264 | 25285264 | PRJNA287283_P_NODE_9660_length_178_cov_0.896000_g9436_i0 | PRJNA287283 | 9660 | 178 | 0.896 | 1.59488 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 324 | 2.89e-84 | NTclustered | gi|2737310786|gb|CP157132.1| | 562 | g9436 | i0 | 99.438 | 100 | 178 | 1 | 100 | 0 | 1 | 178 | 3842446 | 3842623 | Escherichia coli strain UTAK-18 chromosome, complete genome | blastn | 17800 | 324 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;