RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA287283" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA287283 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646945 1646945 PRJNA287283_P_NODE_4522_length_291_cov_2.798319_g4298_i0 PRJNA287283 4522 291 2.798319 8.14310829 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 52.8 0.027   NTclustered gi|393794191|dbj|AK388788.1| 6161 g4298 i0 100 0.0962199312714777 28 0 10 0 192 219 1799 1772 Dugesia japonica cDNA, clone: Dj_aH_000_02497HH.full, full-insert sequence, expressed in adult head blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
22736005 22736005 PRJNA287283_P_NODE_10238_length_176_cov_0.910569_g10014_i0 PRJNA287283 10238 176 0.910569 1.60260144 Ancyrocephalidae 67522 Platyhelminthes Platyhelminthes 320 3.69e-83   NTclustered gi|2655741404|gb|PP191181.1| 341066 g10014 i0 99.432 94.7897727272727 176 1 100 0 1 176 621 796 Scutogyrus longicornis isolate K1-7 large subunit ribosomal RNA gene, partial sequence blastn 16683 320 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Scutogyrus Scutogyrus longicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;