contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA287283" and tax_phylum = "Deinococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2922857 | 2922857 | PRJNA287283_P_NODE_8083_length_187_cov_1.805970_g7859_i0 | PRJNA287283 | 8083 | 187 | 1.80597 | 3.3771639 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 231 | 1.92e-56 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g7859 | i0 | 89.247 | 6.95187165775401 | 186 | 19 | 99 | 1 | 1 | 185 | 7941 | 8126 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 1300 | 231 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 3609731 | 3609731 | PRJNA287283_P_NODE_7183_length_205_cov_1.236842_g6959_i0 | PRJNA287283 | 7183 | 205 | 1.236842 | 2.5355261 | Deinococcus | 1298 | Bacteria | Bacteria | 311 | 2.68e-80 | NTclustered | gi|2706837832|gb|CP149782.1| | 3112952 | g6959 | i0 | 94.608 | 204.409756097561 | 204 | 6 | 99 | 5 | 1 | 203 | 1455431 | 1455232 | Deinococcus sp. VB142 chromosome 1, complete sequence | blastn | 41904 | 311 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 5475608 | 5475608 | PRJNA287283_P_NODE_6065_length_234_cov_1.762431_g5841_i0 | PRJNA287283 | 6065 | 234 | 1.762431 | 4.12408854 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 370 | 5.09e-98 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g5841 | i0 | 95.671 | 208.448717948718 | 231 | 8 | 99 | 2 | 2 | 231 | 1637246 | 1637475 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 48777 | 370 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 12537694 | 12537694 | PRJNA287283_P_NODE_3490_length_340_cov_3.017422_g3266_i0 | PRJNA287283 | 3490 | 340 | 3.017422 | 10.2592348 | Deinococcus | 1298 | Bacteria | Bacteria | 628 | 1.1699999999999999e-175 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g3266 | i0 | 100 | 190.576470588235 | 340 | 0 | 100 | 0 | 1 | 340 | 698 | 359 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 64796 | 628 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 16361653 | 16361653 | PRJNA287283_P_NODE_10733_length_165_cov_2.517857_g10509_i0 | PRJNA287283 | 10733 | 165 | 2.517857 | 4.15446405 | Deinococcus | 1298 | Bacteria | Bacteria | 283 | 4.4899999999999995e-72 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g10509 | i0 | 97.576 | 158.509090909091 | 165 | 4 | 100 | 0 | 1 | 165 | 1519 | 1683 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 26154 | 283 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 16361656 | 16361656 | PRJNA287283_P_NODE_3713_length_330_cov_1.451264_g3489_i0 | PRJNA287283 | 3713 | 330 | 1.451264 | 4.7891712 | Truepera | 332248 | Bacteria | Bacteria | 416 | 9.559999999999998e-112 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g3489 | i0 | 89.394 | 433.39696969697 | 330 | 35 | 100 | 0 | 1 | 330 | 11 | 340 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 143021 | 416 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 21460939 | 21460939 | PRJNA287283_P_NODE_717_length_859_cov_2.903226_g553_i0 | PRJNA287283 | 717 | 859 | 2.903226 | 24.93871134 | Deinococcus | 1298 | Bacteria | Bacteria | 1570 | 0 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g553 | i0 | 99.651 | 216.151338766007 | 859 | 3 | 100 | 0 | 1 | 859 | 1496 | 638 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 185674 | 1570 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 22736008 | 22736008 | PRJNA287283_P_NODE_3818_length_325_cov_1.852941_g3594_i0 | PRJNA287283 | 3818 | 325 | 1.852941 | 6.02205825 | Deinococcus | 1298 | Bacteria | Bacteria | 595 | 1.1299999999999995e-165 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g3594 | i0 | 99.692 | 382.224615384615 | 325 | 1 | 100 | 0 | 1 | 325 | 16 | 340 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 124223 | 601 | 0.990016638935108 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 24011111 | 24011111 | PRJNA287283_P_NODE_9279_length_179_cov_2.285714_g9055_i0 | PRJNA287283 | 9279 | 179 | 2.285714 | 4.09142806 | Truepera | 332248 | Bacteria | Bacteria | 315 | 1.75e-81 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g9055 | i0 | 99.422 | 180.279329608939 | 173 | 1 | 97 | 0 | 1 | 173 | 2106 | 1934 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 32270 | 315 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 25285260 | 25285260 | PRJNA287283_P_NODE_5900_length_239_cov_1.134409_g5676_i0 | PRJNA287283 | 5900 | 239 | 1.134409 | 2.71123751 | Truepera | 332248 | Bacteria | Bacteria | 335 | 1.9e-87 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g5676 | i0 | 94.091 | 793.497907949791 | 220 | 13 | 92 | 0 | 20 | 239 | 650 | 869 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 189646 | 335 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;