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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA287283" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Sar · 23 ✖

bioproject 1

  • PRJNA287283 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2922851 2922851 PRJNA287283_P_NODE_3783_length_327_cov_1.233577_g3559_i0 PRJNA287283 3783 327 1.233577 4.03379679 Prorocentrum minimum 39449 SAR_Eukaryotes SAR_Eukaryotes 220 7.97e-53   NTclustered gi|37727275|gb|AY169231.1| 39449 g3559 i0 79.062 15.5749235474006 320 67 98 0 1 320 336 655 Prorocentrum minimum clone end10b ribulose 1,5-bisphosphate carboxylase oxygenase form II (rbc3) mRNA, partial cds; nuclear gene for chloroplast product blastn 5093 220 1 Eukaryota Sar     Dinophyceae Prorocentrales Prorocentraceae Prorocentrum Prorocentrum minimum
4199311 4199311 PRJNA287283_P_NODE_3724_length_330_cov_0.967509_g3500_i0 PRJNA287283 3724 330 0.967509 3.1927797 Piscinoodinium sp. 2862367 SAR_Eukaryotes SAR_Eukaryotes 588 1.9099999999999998e-163   NTclustered gi|2594576236|gb|OR704324.1| 2862367 g3500 i0 98.788 99.4787878787879 330 4 100 0 1 330 51 380 Piscinoodinium sp. isolate Andaman-PSIII small subunit ribosomal RNA gene, partial sequence blastn 32828 588 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Piscinoodinium Piscinoodinium sp.
5475599 5475599 PRJNA287283_P_NODE_2865_length_383_cov_1.224242_g2641_i0 PRJNA287283 2865 383 1.224242 4.68884686 Amphidinium carterae 2961 SAR_Eukaryotes SAR_Eukaryotes 309 1.9600000000000003e-79   NTclustered gi|193890883|gb|EU742748.1| 2961 g2641 i0 84.967 76.4046997389034 306 45 80 1 67 372 96 400 Amphidinium carterae strain CCMP1314 clone cB2_ps truncated actin mRNA, complete cds blastn 29263 309 1 Eukaryota Sar     Dinophyceae Amphidiniales Amphidiniaceae Amphidinium Amphidinium carterae
5475603 5475603 PRJNA287283_P_NODE_5305_length_258_cov_1.814634_g5081_i0 PRJNA287283 5305 258 1.814634 4.68175572 Gymnodinium aureolum 107757 SAR_Eukaryotes SAR_Eukaryotes 200 7.93e-47   NTclustered gi|422900967|gb|JX262544.1| 107757 g5081 i0 81.124 14.3372093023256 249 47 97 0 10 258 857 609 Gymnodinium aureolum heat shock protein 90 (hsp90) gene, partial cds blastn 3699 200 1 Eukaryota Sar     Dinophyceae Gymnodiniales Gymnodiniaceae Gymnodinium Gymnodinium aureolum
8025474 8025474 PRJNA287283_P_NODE_7307_length_202_cov_1.127517_g7083_i0 PRJNA287283 7307 202 1.127517 2.27758434 Trichodina centrostrigata 1682383 SAR_Eukaryotes SAR_Eukaryotes 374 3.3e-99   NTclustered gi|1685826183|gb|MN071233.1| 1682383 g7083 i0 100 57.6683168316832 202 0 100 0 1 202 771 570 Trichodina centrostrigata isolate Q1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11649 374 1 Eukaryota Sar   Ciliophora Oligohymenophorea Mobilida Trichodinidae Trichodina Trichodina centrostrigata
9300252 9300252 PRJNA287283_P_NODE_4448_length_295_cov_1.305785_g4224_i0 PRJNA287283 4448 295 1.305785 3.85206575 Margalefidinium polykrikoides 77300 SAR_Eukaryotes SAR_Eukaryotes 231 3.2799999999999997e-56   NTclustered gi|906410606|gb|KP010829.1| 77300 g4224 i0 82.692 4.5864406779661 260 45 88 0 13 272 2054 1795 Cochlodinium polykrikoides heat shock protein 90 (HSP90) mRNA, complete cds blastn 1353 231 1 Eukaryota Sar     Dinophyceae Gymnodiniales Gymnodiniaceae Margalefidinium Margalefidinium polykrikoides
11850826 11850826 PRJNA287283_P_NODE_10430_length_175_cov_0.918033_g10206_i0 PRJNA287283 10430 175 0.918033 1.60655775 Symbiodinium muscatinei 128924 SAR_Eukaryotes SAR_Eukaryotes 134 5.12e-27   NTclustered gi|32454982|gb|AY314974.1| 128924 g10206 i0 88.288 0.634285714285714 111 13 63 0 1 111 138 248 Symbiodinium muscatinei glyceraldehyde-3-phosphate dehydrogenase (smgap2) mRNA, complete cds blastn 111 134 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium muscatinei
12537690 12537690 PRJNA287283_P_NODE_2210_length_445_cov_1.793367_g1987_i0 PRJNA287283 2210 445 1.793367 7.98048315 Suessiaceae 89955 SAR_Eukaryotes SAR_Eukaryotes 673 0   NTclustered gi|18476145|gb|AY036080.1| 89957 g1987 i0 93.96 99.1955056179775 447 23 100 4 1 445 277 721 Polarella glacialis strain CCMP1383 large subunit ribosomal RNA gene, partial sequence blastn 44142 678 0.992625368731563 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
13126029 13126029 PRJNA287283_P_NODE_8851_length_181_cov_1.367188_g8627_i0 PRJNA287283 8851 181 1.367188 2.47461028 Durusdinium sp. 2486700 SAR_Eukaryotes SAR_Eukaryotes 180 6.759999999999998e-41   NTclustered gi|1888575071|gb|MN148731.1| 2486700 g8627 i0 84.53 1.55801104972376 181 28 100 0 1 181 371 191 Durusdinium sp. ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) mRNA, partial cds blastn 282 180 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Durusdinium Durusdinium sp.
15674906 15674906 PRJNA287283_P_NODE_3733_length_329_cov_2.090580_g3509_i0 PRJNA287283 3733 329 2.09058 6.8780082 Kryptoperidinium triquetrum 66468 SAR_Eukaryotes SAR_Eukaryotes 298 3.6e-76   NTclustered gi|54399509|gb|AY729485.1| 66468 g3509 i0 83.232 0.996960486322188 328 51 99 4 4 329 1104 779 Heterocapsa triquetra EF-1 alpha-like protein (efl) mRNA, complete cds blastn 328 298 1 Eukaryota Sar     Dinophyceae Peridiniales Kryptoperidiniaceae Kryptoperidinium Kryptoperidinium triquetrum
15674913 15674913 PRJNA287283_P_NODE_6333_length_227_cov_0.965517_g6109_i0 PRJNA287283 6333 227 0.965517 2.19172359 Amphidinium carterae 2961 SAR_Eukaryotes SAR_Eukaryotes 156 1.4999999999999999e-33   NTclustered gi|317134990|gb|GU373020.1| 2961 g6109 i0 87.5 6.38325991189427 136 15 59 2 30 164 470 336 Amphidinium carterae strain CCMP1314 clone 2 ribosomal protein S27a (RP-S27a) mRNA, complete cds blastn 1449 156 1 Eukaryota Sar     Dinophyceae Amphidiniales Amphidiniaceae Amphidinium Amphidinium carterae
15674918 15674918 PRJNA287283_P_NODE_7233_length_203_cov_2.413333_g7009_i0 PRJNA287283 7233 203 2.413333 4.89906599 Symbiodinium kawagutii 104179 SAR_Eukaryotes SAR_Eukaryotes 104 4.82e-18   NTclustered gi|512784092|gb|KC940714.1| 104179 g7009 i0 80.292 4 137 27 67 0 1 137 216 80 Symbiodinium kawagutii strain CCMP2468 clone SymkaFL1061064221954(5'-), partial sequence blastn 812 104 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium kawagutii
15674924 15674924 PRJNA287283_P_NODE_9273_length_179_cov_3.095238_g9049_i0 PRJNA287283 9273 179 3.095238 5.54047602 Dinophyceae sp. 1918384 SAR_Eukaryotes SAR_Eukaryotes 159 8.689999999999998e-35   NTclustered gi|2509715033|gb|MZ825179.1| 1918384 g9049 i0 82.955 0.983240223463687 176 30 98 0 4 179 509 334 Dinophyceae sp. clone C-119214 heat shock protein 90 (Hsp90) mRNA, complete cds blastn 176 159 1 Eukaryota Sar     Dinophyceae       Dinophyceae sp.
16949569 16949569 PRJNA287283_P_NODE_10274_length_176_cov_0.910569_g10050_i0 PRJNA287283 10274 176 0.910569 1.60260144 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 207 2.99e-49   NTclustered gi|471226989|ref|XM_004032470.1| 5932 g10050 i0 88.757 6.25 169 19 96 0 8 176 237 69 Ichthyophthirius multifiliis ubiquitin family protein, putative (IMG5_120960) mRNA, complete cds blastn 1100 207 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
17636811 17636811 PRJNA287283_P_NODE_6074_length_234_cov_1.287293_g5850_i0 PRJNA287283 6074 234 1.287293 3.01226562 Gonyaulacales 40984 SAR_Eukaryotes SAR_Eukaryotes 361 3.0699999999999996e-95   NTclustered gi|281331145|dbj|AB433583.1| 2926 g5850 i0 94.468 92.7606837606838 235 11 100 2 1 234 777 1010 Alexandrium tamarense chloroplast psbD mRNA for photosystem II protein D2, partial cds blastn 21706 361 1 Eukaryota Sar     Dinophyceae Gonyaulacales Pyrocystaceae Alexandrium Alexandrium tamarense
19498112 19498112 PRJNA287283_P_NODE_3516_length_339_cov_1.174825_g3292_i0 PRJNA287283 3516 339 1.174825 3.98265675 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 219 2.9799999999999998e-52   NTclustered gi|35210459|dbj|AB106692.1| 89957 g3292 i0 83.475 3.29498525073746 236 37 69 2 105 339 1 235 Polarella glacialis GapC3 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds blastn 1117 219 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
19498119 19498119 PRJNA287283_P_NODE_5836_length_241_cov_0.909574_g5612_i0 PRJNA287283 5836 241 0.909574 2.19207334 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 124 4.53e-24   NTclustered gi|2795629584|ref|XM_068068822.1| 483139 g5612 i0 85.124 10.8796680497925 121 18 50 0 119 239 1605 1485 Cystoisospora suis tubulin alpha chain (CSUI_008696), mRNA blastn 2622 124 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
19498120 19498120 PRJNA287283_P_NODE_6316_length_227_cov_1.609195_g6092_i0 PRJNA287283 6316 227 1.609195 3.65287265 Leiocephalium pseudosanguineum 2304654 SAR_Eukaryotes SAR_Eukaryotes 337 4.9799999999999995e-88   NTclustered gi|983169665|dbj|LC068840.1| 2304654 g6092 i0 93.392 100.04845814978 227 15 100 0 1 227 2512 2738 Leiocephalium pseudosanguineum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, strain: it12-10kt blastn 22711 337 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Leiocephalium Leiocephalium pseudosanguineum
19498123 19498123 PRJNA287283_P_NODE_7296_length_202_cov_1.476510_g7072_i0 PRJNA287283 7296 202 1.47651 2.9825502 Symbiodinium kawagutii 104179 SAR_Eukaryotes SAR_Eukaryotes 198 2.13e-46   NTclustered gi|512793196|gb|KC949818.1| 104179 g7072 i0 86.592 5.45544554455446 179 24 89 0 17 195 434 256 Symbiodinium kawagutii strain CCMP2468 clone SymkaFL1061064215408(5'-), partial sequence blastn 1102 198 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium kawagutii
20185233 20185233 PRJNA287283_P_NODE_6116_length_233_cov_1.244444_g5892_i0 PRJNA287283 6116 233 1.244444 2.89955452 Symbiodiniaceae 252141 SAR_Eukaryotes SAR_Eukaryotes 198 2.5299999999999998e-46   NTclustered gi|117937764|gb|EF036594.1| 2951 g5892 i0 82.171 57.9742489270386 258 20 100 17 1 233 1295 1039 Symbiodinium microadriaticum strain CCMP 830 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial blastn 13508 198 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum
22048634 22048634 PRJNA287283_P_NODE_2178_length_449_cov_1.292929_g1955_i0 PRJNA287283 2178 449 1.292929 5.80525121 uncultured dinoflagellate 187300 SAR_Eukaryotes SAR_Eukaryotes 320 1.08e-82   NTclustered gi|309254050|gb|GU553986.1| 187300 g1955 i0 81.795 47.2271714922049 390 63 86 7 1 386 453 68 uncultured dinoflagellate clone AP-cDNA6-4 mRNA sequence blastn 21205 320 1 Eukaryota Sar     Dinophyceae       uncultured dinoflagellate
23324216 23324216 PRJNA287283_P_NODE_10439_length_175_cov_0.918033_g10215_i0 PRJNA287283 10439 175 0.918033 1.60655775 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 254 3.77e-63   NTclustered gi|471229096|ref|XM_004035365.1| 5932 g10215 i0 93.529 0.971428571428571 170 11 97 0 1 170 230 61 Ichthyophthirius multifiliis ribosomal phosphoprotein, putative (IMG5_099550) mRNA, complete cds blastn 170 254 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
23324222 23324222 PRJNA287283_P_NODE_5059_length_267_cov_1.710280_g4835_i0 PRJNA287283 5059 267 1.71028 4.5664476 Akashiwo sanguinea 143672 SAR_Eukaryotes SAR_Eukaryotes 178 3.86e-40   NTclustered gi|311063244|gb|GU295192.1| 143672 g4835 i0 79.07 3.68539325842697 258 54 97 0 1 258 1342 1599 Akashiwo sanguinea heat shock protein 90 gene, partial cds blastn 984 178 1 Eukaryota Sar     Dinophyceae Gymnodiniales Gymnodiniaceae Akashiwo Akashiwo sanguinea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;