RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA285816 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646915 1646915 PRJNA285816_S_NODE_682_length_753_cov_25.471591_g620_i0 PRJNA285816 682 753 25.471591 191.80108023 Linderina pennispora 61395 Fungi Fungi 327 1.12e-84   NTclustered gi|2028325604|ref|XM_040889545.1| 61395 g620 i0 79.78 30.7436918990704 455 88 60 4 12 464 46 498 Linderina pennispora 40S ribosomal protein S9 (DL89DRAFT_279070), partial mRNA blastn 23150 327 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
4199263 4199263 PRJNA285816_S_NODE_6324_length_277_cov_3.127193_g6222_i0 PRJNA285816 6324 277 3.127193 8.66232461 Linderina pennispora 61395 Fungi Fungi 56.5 0.002   NTclustered gi|2028317756|ref|XM_040887104.1| 61395 g6222 i0 100 0.310469314079422 30 0 11 0 27 56 1564 1593 Linderina pennispora Calreticulin-domain-containing protein (DL89DRAFT_266517), mRNA blastn 86 56.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
20773416 20773416 PRJNA285816_S_NODE_16037_length_195_cov_1.390411_g15935_i0 PRJNA285816 16037 195 1.390411 2.71130145 Kickxella alabastrina 61397 Fungi Fungi 58.4 3.62e-4   NTclustered gi|2324005906|ref|XM_051538539.1| 61397 g15935 i0 97.059 0.317948717948718 34 1 17 0 8 41 313 346 Kickxella alabastrina SRP40, C-terminal domain-containing protein (BX661DRAFT_203729), mRNA blastn 62 58.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;