RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA285816 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6161949 6161949 PRJNA285816_S_NODE_205_length_1232_cov_207.481826_g170_i1 PRJNA285816 205 1232 207.481826 2556.17609632 Fungi 4751 Fungi Fungi 183 4.279999999999999e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g170 i1 95.652 12.4918831168831 115 4 9 1 1038 1152 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15390 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
11850564 11850564 PRJNA285816_S_NODE_16010_length_195_cov_1.630137_g15908_i0 PRJNA285816 16010 195 1.630137 3.17876715 Nematocida minor 1912983 Fungi Fungi 52.8 0.017   NTclustered gi|2323917550|ref|XM_051477789.1| 1912983 g15908 i0 94.286 0.179487179487179 35 1 17 1 43 76 769 735 Nematocida minor uncharacterized protein (NEMIN01_1847), partial mRNA blastn 35 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida minor
25285207 25285207 PRJNA285816_S_NODE_200_length_1242_cov_205.363789_g170_i0 PRJNA285816 200 1242 205.363789 2550.61825938 Fungi 4751 Fungi Fungi 183 4.31e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g170 i0 95.652 11.9903381642512 115 4 9 1 1038 1152 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14892 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;