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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA285816 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646694 1646694 PRJNA285816_S_NODE_13842_length_205_cov_4.974359_g13740_i0 PRJNA285816 13842 205 4.974359 10.19743595 Paravahlkampfia sp. A1PW2 932695 Heterolobosea other_Eukaryota 379 7.229999999999999e-101   NTclustered gi|313665838|gb|GU230754.1| 932695 g13740 i0 100 23.4731707317073 205 0 100 0 1 205 42 246 Paravahlkampfia sp. A1PW2 18S ribosomal RNA gene, complete sequence blastn 4812 379 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. A1PW2
2922523 2922523 PRJNA285816_S_NODE_11343_length_220_cov_2.391813_g11241_i0 PRJNA285816 11343 220 2.391813 5.2619886 Paravahlkampfia sp. A1PW2 932695 Heterolobosea other_Eukaryota 396 7.809999999999997e-106   NTclustered gi|313665838|gb|GU230754.1| 932695 g11241 i0 99.091 39.6045454545455 220 2 100 0 1 220 1381 1600 Paravahlkampfia sp. A1PW2 18S ribosomal RNA gene, complete sequence blastn 8713 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. A1PW2
5475300 5475300 PRJNA285816_S_NODE_13845_length_205_cov_4.301282_g13743_i0 PRJNA285816 13845 205 4.301282 8.8176281 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 124 3.74e-24   NTclustered gi|2101506740|gb|MZ430524.1| 5763 g13743 i0 77.561 24.1268292682927 205 46 100 0 1 205 5348 5144 Naegleria fowleri isolate AY27 rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; non-ribosomal sequence; and hypothetical protein genes, complete cds blastn 4946 124 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
5475484 5475484 PRJNA285816_S_NODE_27425_length_164_cov_1.686957_g27323_i0 PRJNA285816 27425 164 1.686957 2.76660948 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 298 1.59e-76   NTclustered gi|2515557648|gb|OR045415.1| 234921 g27323 i0 99.39 36.4390243902439 164 1 100 0 1 164 5274 5437 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 5976 298 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
5475552 5475552 PRJNA285816_S_NODE_605_length_793_cov_3.752688_g546_i0 PRJNA285816 605 793 3.752688 29.75881584 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 141 1.6499999999999999e-28   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g546 i0 87.603 15.40605296343 121 15 34 0 620 740 4131 4251 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12217 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
7437054 7437054 PRJNA285816_S_NODE_17526_length_189_cov_1.178571_g17424_i0 PRJNA285816 17526 189 1.178571 2.22749919 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.9 4.45e-13   NTclustered gi|2119424803|ref|XM_044696000.1| 51637 g17424 i0 98 26.4074074074074 50 1 26 0 9 58 514 563 Naegleria lovaniensis uncharacterized protein (C9374_000617), partial mRNA blastn 4991 87.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
8025170 8025170 PRJNA285816_S_NODE_13507_length_207_cov_2.468354_g13405_i0 PRJNA285816 13507 207 2.468354 5.10949278 Paravahlkampfia sp. A1PW2 932695 Heterolobosea other_Eukaryota 377 2.63e-100   NTclustered gi|313665838|gb|GU230754.1| 932695 g13405 i0 99.519 52.1304347826087 208 0 100 1 1 207 1570 1777 Paravahlkampfia sp. A1PW2 18S ribosomal RNA gene, complete sequence blastn 10791 377 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. A1PW2
9987275 9987275 PRJNA285816_S_NODE_23828_length_169_cov_1.300000_g23726_i0 PRJNA285816 23828 169 1.3 2.197 Naegleria 5761 Heterolobosea other_Eukaryota 313 5.859999999999999e-81   NTclustered gi|2618963742|gb|OR769034.1| 5762 g23726 i0 100 33.8461538461538 169 0 100 0 1 169 5295 5127 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 5720 313 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10575813 10575813 PRJNA285816_S_NODE_10949_length_223_cov_2.649425_g10847_i0 PRJNA285816 10949 223 2.649425 5.90821775 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 139 1.48e-28   NTclustered gi|2119450329|ref|XM_044698277.1| 51637 g10847 i0 82.317 1.08520179372197 164 25 73 3 1 162 3788 3949 Naegleria lovaniensis uncharacterized protein (C9374_008224), partial mRNA blastn 242 139 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
10576033 10576033 PRJNA285816_S_NODE_28529_length_163_cov_0.912281_g28427_i0 PRJNA285816 28529 163 0.912281 1.48701803 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 60.2 8.12e-5   NTclustered gi|290986748|ref|XM_002676040.1| 5762 g28427 i0 91.111 0.276073619631902 45 3 27 1 16 59 2885 2841 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_68650), partial mRNA blastn 45 60.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11850514 11850514 PRJNA285816_S_NODE_10510_length_226_cov_4.915254_g10408_i0 PRJNA285816 10510 226 4.915254 11.10847404 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 196 8.78e-46   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g10408 i0 90.132 57.7566371681416 152 14 67 1 75 226 2901 3051 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13053 196 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12537615 12537615 PRJNA285816_S_NODE_14270_length_203_cov_2.038961_g14168_i0 PRJNA285816 14270 203 2.038961 4.13909083 Naegleria 5761 Heterolobosea other_Eukaryota 375 9.24e-100   NTclustered gi|2618963742|gb|OR769034.1| 5762 g14168 i0 100 99.3546798029557 203 0 100 0 1 203 1333 1535 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20169 375 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13812503 13812503 PRJNA285816_S_NODE_15971_length_195_cov_2.212329_g15869_i0 PRJNA285816 15971 195 2.212329 4.31404155 Naegleria 5761 Heterolobosea other_Eukaryota 355 1.15e-93   NTclustered gi|32966202|gb|AY266314.1| 5762 g15869 i0 99.487 100 195 1 100 0 1 195 564 370 Naegleria gruberi 18S ribosomal RNA gene, partial sequence blastn 19500 355 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15674863 15674863 PRJNA285816_S_NODE_6173_length_280_cov_2.142857_g6071_i0 PRJNA285816 6173 280 2.142857 5.9999996 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 507 4.58e-139   NTclustered gi|2618963742|gb|OR769034.1| 5762 g6071 i0 99.286 52.3714285714286 280 2 100 0 1 280 2857 2578 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 14664 507 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17636756 17636756 PRJNA285816_S_NODE_14274_length_203_cov_1.948052_g14172_i0 PRJNA285816 14274 203 1.948052 3.95454556 Naegleria 5761 Heterolobosea other_Eukaryota 375 9.24e-100   NTclustered gi|2618963742|gb|OR769034.1| 5762 g14172 i0 100 98.8965517241379 203 0 100 0 1 203 1580 1782 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20076 375 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17636766 17636766 PRJNA285816_S_NODE_18834_length_184_cov_1.829630_g18732_i0 PRJNA285816 18834 184 1.82963 3.3665192 Naegleria 5761 Heterolobosea other_Eukaryota 340 2.99e-89   NTclustered gi|2618963742|gb|OR769034.1| 5762 g18732 i0 100 38.179347826087 184 0 100 0 1 184 3427 3244 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7025 340 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18910558 18910558 PRJNA285816_S_NODE_14455_length_202_cov_2.052288_g14353_i0 PRJNA285816 14455 202 2.052288 4.14562176 Naegleria 5761 Heterolobosea other_Eukaryota 374 3.3e-99   NTclustered gi|2618963742|gb|OR769034.1| 5762 g14353 i0 100 9.96039603960396 202 0 100 0 1 202 5596 5797 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2012 374 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20185223 20185223 PRJNA285816_S_NODE_8236_length_249_cov_2.780000_g8134_i0 PRJNA285816 8236 249 2.78 6.9222 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 449 6.840000000000001e-122   NTclustered gi|1121487417|gb|KX068999.1| 166958 g8134 i0 99.197 77.004016064257 249 2 100 0 1 249 621 373 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 19174 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
20773348 20773348 PRJNA285816_S_NODE_10277_length_228_cov_2.916201_g10175_i0 PRJNA285816 10277 228 2.916201 6.64893828 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 126 1.18e-24   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g10175 i0 82.517 6.06578947368421 143 25 63 0 1 143 3377 3235 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1383 126 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20773421 20773421 PRJNA285816_S_NODE_1637_length_516_cov_5.132762_g1536_i0 PRJNA285816 1637 516 5.132762 26.48505192 Paravahlkampfia sp. A1PW2 932695 Heterolobosea other_Eukaryota 693 0   NTclustered gi|313665838|gb|GU230754.1| 932695 g1536 i0 98.966 46.2228682170543 387 4 75 0 1 387 926 540 Paravahlkampfia sp. A1PW2 18S ribosomal RNA gene, complete sequence blastn 23851 693 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. A1PW2
24011034 24011034 PRJNA285816_S_NODE_15779_length_196_cov_1.938776_g15677_i0 PRJNA285816 15779 196 1.938776 3.80000096 Naegleria 5761 Heterolobosea other_Eukaryota 363 6.899999999999998e-96   NTclustered gi|2618963742|gb|OR769034.1| 5762 g15677 i0 100 62.0612244897959 196 0 100 0 1 196 4433 4238 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 12164 363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;