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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA285816 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4199297 4199297 PRJNA285816_S_NODE_944_length_657_cov_6.064145_g872_i0 PRJNA285816 944 657 6.064145 39.84143265 Polychytrium aggregatum 110093 Fungi Fungi 200 2.2099999999999998e-46   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g872 i0 76.485 21.1917808219178 404 73 60 16 200 595 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 200 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
5475480 5475480 PRJNA285816_S_NODE_2705_length_407_cov_16.178771_g2603_i0 PRJNA285816 2705 407 16.178771 65.84759797 Batrachochytrium dendrobatidis 109871 Fungi Fungi 121 1.06e-22   NTclustered gi|575480991|ref|XM_006679727.1| 684364 g2603 i0 81.046 0.886977886977887 153 27 37 2 234 385 176 25 Batrachochytrium dendrobatidis JAM81 uncharacterized protein (BATDEDRAFT_12294), partial mRNA blastn 361 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
5475506 5475506 PRJNA285816_S_NODE_285_length_1070_cov_16.727718_g246_i0 PRJNA285816 285 1070 16.727718 178.9865826 Fimicolochytrium jonesii 1396493 Fungi Fungi 640 1.8199999999999997e-178   NTclustered gi|2432080769|ref|XM_053070516.1| 1396493 g246 i0 80.324 81.4336448598131 864 154 80 13 46 901 214 1069 Fimicolochytrium jonesii mitochondrial carrier domain-containing protein (EV422DRAFT_532223), mRNA blastn 87134 640 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
6749820 6749820 PRJNA285816_S_NODE_4106_length_335_cov_4.486014_g4004_i0 PRJNA285816 4106 335 4.486014 15.0281469 Polychytrium aggregatum 110093 Fungi Fungi 252 2.9e-62   NTclustered gi|2432131435|ref|XM_053109312.1| 110093 g4004 i0 80.363 81.8477611940299 331 65 99 0 1 331 192 522 Polychytrium aggregatum beta-tubulin (BJ171DRAFT_487560), mRNA blastn 27419 252 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18223777 18223777 PRJNA285816_S_NODE_4255_length_330_cov_1.822064_g4153_i0 PRJNA285816 4255 330 1.822064 6.0128112 Polychytrium aggregatum 110093 Fungi Fungi 204 8.1e-48   NTclustered gi|2432136347|ref|XM_053109928.1| 110093 g4153 i0 78.261 13.1545454545455 322 66 97 4 1 320 530 849 Polychytrium aggregatum carboxyl transferase (BJ171DRAFT_493626), mRNA blastn 4341 204 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18223786 18223786 PRJNA285816_S_NODE_5175_length_302_cov_8.027668_g5073_i0 PRJNA285816 5175 302 8.027668 24.24355736 Polychytrium aggregatum 110093 Fungi Fungi 121 7.6e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g5073 i0 84.252 7.10927152317881 127 16 41 3 148 272 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19497839 19497839 PRJNA285816_S_NODE_14216_length_204_cov_0.929032_g14114_i0 PRJNA285816 14216 204 0.929032 1.89522528 Fimicolochytrium jonesii 1396493 Fungi Fungi 56.5 0.001   NTclustered gi|2432048076|ref|XM_053074395.1| 1396493 g14114 i0 100 2.10294117647059 30 0 15 0 156 185 1312 1283 Fimicolochytrium jonesii karyopherin Kap95 (EV422DRAFT_7892), mRNA blastn 429 56.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
23323922 23323922 PRJNA285816_S_NODE_13019_length_210_cov_1.515528_g12917_i0 PRJNA285816 13019 210 1.515528 3.1826088 Neocallimastix patriciarum 4758 Fungi Fungi 156 1.37e-33   NTclustered gi|18874267|gb|AY033433.1| 4758 g12917 i0 83.051 12.3666666666667 177 24 83 6 37 210 737 910 Neocallimastix patriciarum ADP/ATP carrier (AAC) mRNA, complete cds; nuclear gene for hydrogenosomal product blastn 2597 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix patriciarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;