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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA285816 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6161956 6161956 PRJNA285816_S_NODE_25425_length_167_cov_0.898305_g25323_i0 PRJNA285816 25425 167 0.898305 1.50016935 Metazoa 33208 Annelida Annelida 62.1 2.33e-5   NTclustered gi|1315515396|gb|MG197688.1| 6359 g25323 i0 94.872 18.8083832335329 39 2 23 0 3 41 1261 1299 Platynereis dumerilii NaKATPase mRNA, complete cds blastn 3141 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
14401059 14401059 PRJNA285816_S_NODE_27392_length_164_cov_1.808696_g27290_i0 PRJNA285816 27392 164 1.808696 2.96626144 Helobdella robusta 6412 Annelida Annelida 56.5 0.001   NTclustered gi|675888865|ref|XM_009031687.1| 6412 g27290 i0 100 0.524390243902439 30 0 18 0 3 32 2501 2530 Helobdella robusta hypothetical protein partial mRNA blastn 86 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
20773491 20773491 PRJNA285816_S_NODE_21877_length_174_cov_9.160000_g21775_i0 PRJNA285816 21877 174 9.16 15.9384 Hirudo verbana 311461 Annelida Annelida 60.2 8.75e-5   NTclustered gi|2918369710|emb|OZ237789.1| 311461 g21775 i0 100 4.51724137931035 32 0 20 0 53 84 1760016 1760047 Hirudo verbana genome assembly, chromosome: 11 blastn 786 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;