contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1059201 | 1059201 | PRJNA285816_S_NODE_28581_length_163_cov_0.912281_g28479_i0 | PRJNA285816 | 28581 | 163 | 0.912281 | 1.48701803 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 180 | 5.97e-41 | NTclustered | gi|2874253712|emb|OY969554.1| | 174324 | g28479 | i0 | 86.667 | 43.1165644171779 | 165 | 18 | 100 | 4 | 1 | 163 | 1826549 | 1826387 | MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1 | blastn | 7028 | 180 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 2922569 | 2922569 | PRJNA285816_S_NODE_14883_length_200_cov_3.238411_g14781_i0 | PRJNA285816 | 14883 | 200 | 3.238411 | 6.476822 | uncultured Prosthecobacter sp. | 522608 | Bacteria | Bacteria | 370 | 4.22e-98 | NTclustered | gi|595333799|gb|KF945042.1| | 522608 | g14781 | i0 | 100 | 99.635 | 200 | 0 | 100 | 0 | 1 | 200 | 982 | 1181 | Uncultured Prosthecobacter sp. clone FCW2D4 16S ribosomal RNA gene, partial sequence | blastn | 19927 | 370 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | uncultured Prosthecobacter sp. | |
| 2922710 | 2922710 | PRJNA285816_S_NODE_24843_length_168_cov_0.873950_g24741_i0 | PRJNA285816 | 24843 | 168 | 0.87395 | 1.468236 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 215 | 1.7e-51 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g24741 | i0 | 89.881 | 9.05357142857143 | 168 | 16 | 100 | 1 | 1 | 168 | 2191348 | 2191182 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 1521 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 2922721 | 2922721 | PRJNA285816_S_NODE_26043_length_166_cov_1.324786_g25941_i0 | PRJNA285816 | 26043 | 166 | 1.324786 | 2.19914476 | Caulifigura coniformis | 2527983 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1712508784|gb|CP036271.1| | 2527983 | g25941 | i0 | 100 | 0.180722891566265 | 30 | 0 | 18 | 0 | 101 | 130 | 250837 | 250866 | Caulifigura coniformis strain Pan44 chromosome | blastn | 30 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Caulifigura | Caulifigura coniformis | |
| 4199304 | 4199304 | PRJNA285816_S_NODE_9924_length_231_cov_2.302198_g9822_i0 | PRJNA285816 | 9924 | 231 | 2.302198 | 5.31807738 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 414 | 2.29e-111 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g9822 | i0 | 99.13 | 128.108225108225 | 230 | 2 | 99 | 0 | 2 | 231 | 326 | 555 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 29593 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 5475271 | 5475271 | PRJNA285816_S_NODE_11225_length_221_cov_2.058140_g11123_i0 | PRJNA285816 | 11225 | 221 | 2.05814 | 4.5484894 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 392 | 1.0199999999999999e-104 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g11123 | i0 | 98.643 | 152.764705882353 | 221 | 3 | 100 | 0 | 1 | 221 | 573 | 793 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 33761 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 6749638 | 6749638 | PRJNA285816_S_NODE_17406_length_189_cov_2.185714_g17304_i0 | PRJNA285816 | 17406 | 189 | 2.185714 | 4.13099946 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 344 | 2.39e-90 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g17304 | i0 | 99.471 | 277.989417989418 | 189 | 1 | 100 | 0 | 1 | 189 | 944 | 1132 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 52540 | 344 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 8025416 | 8025416 | PRJNA285816_S_NODE_5227_length_301_cov_3.523810_g5125_i0 | PRJNA285816 | 5227 | 301 | 3.52381 | 10.6066681 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 556 | 4.87e-154 | NTclustered | gi|164510704|emb|AJ966883.1| | 48466 | g5125 | i0 | 100 | 280.794019933555 | 301 | 0 | 100 | 0 | 1 | 301 | 4805 | 4505 | Prosthecobacter vanneervenii 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 12252 | blastn | 84519 | 556 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 11262359 | 11262359 | PRJNA285816_S_NODE_8689_length_244_cov_1.189744_g8587_i0 | PRJNA285816 | 8689 | 244 | 1.189744 | 2.90297536 | Candidatus Rhabdochlamydia | 292833 | Bacteria | Bacteria | 351 | 1.9399999999999998e-92 | NTclustered | gi|2082223669|gb|CP075585.1| | 225148 | g8587 | i0 | 92.683 | 159.811475409836 | 246 | 14 | 100 | 4 | 1 | 244 | 1019600 | 1019843 | Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome | blastn | 38994 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Rhabdochlamydia | Candidatus Rhabdochlamydia porcellionis | |
| 11850600 | 11850600 | PRJNA285816_S_NODE_18810_length_184_cov_1.962963_g18708_i0 | PRJNA285816 | 18810 | 184 | 1.962963 | 3.61185192 | Coraliomargarita algicola | 3092156 | Bacteria | Bacteria | 91.6 | 3.33e-14 | NTclustered | gi|2623481368|gb|CP138858.1| | 3092156 | g18708 | i0 | 83.178 | 25.0815217391304 | 107 | 10 | 54 | 6 | 79 | 178 | 1496467 | 1496362 | Coraliomargarita algicola strain J2-16 chromosome, complete genome | blastn | 4615 | 91.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita algicola | |
| 11850748 | 11850748 | PRJNA285816_S_NODE_29950_length_159_cov_2.381818_g29848_i0 | PRJNA285816 | 29950 | 159 | 2.381818 | 3.78709062 | Aquisphaera giovannonii | 406548 | Bacteria | Bacteria | 176 | 7.49e-40 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g29848 | i0 | 87.179 | 341.779874213836 | 156 | 18 | 97 | 2 | 5 | 159 | 9143375 | 9143221 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 54343 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 12537636 | 12537636 | PRJNA285816_S_NODE_20570_length_178_cov_5.503876_g20468_i0 | PRJNA285816 | 20570 | 178 | 5.503876 | 9.79689928 | Bacteria | 2 | Bacteria | Bacteria | 183 | 5.12e-42 | NTclustered | gi|2076416356|gb|CP076040.1| | 2684114 | g20468 | i0 | 86.391 | 81.7022471910112 | 169 | 22 | 94 | 1 | 1 | 168 | 4360171 | 4360339 | Opitutia bacterium ISCC 52 isolate E3 chromosome, complete genome | blastn | 14543 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium ISCC 52 | ||||
| 13125788 | 13125788 | PRJNA285816_S_NODE_19071_length_183_cov_2.380597_g18969_i0 | PRJNA285816 | 19071 | 183 | 2.380597 | 4.35649251 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 224 | 3.1199999999999996e-54 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g18969 | i0 | 90.23 | 42.6885245901639 | 174 | 14 | 95 | 3 | 11 | 183 | 2190391 | 2190220 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 7812 | 224 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 14400951 | 14400951 | PRJNA285816_S_NODE_19372_length_182_cov_1.954887_g19270_i0 | PRJNA285816 | 19372 | 182 | 1.954887 | 3.55789434 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 337 | 3.82e-88 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g19270 | i0 | 100 | 126.230769230769 | 182 | 0 | 100 | 0 | 1 | 182 | 1488 | 1669 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 22974 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 16361650 | 16361650 | PRJNA285816_S_NODE_8933_length_241_cov_1.333333_g8831_i0 | PRJNA285816 | 8933 | 241 | 1.333333 | 3.21333253 | Gemmata | 113 | Bacteria | Bacteria | 296 | 9.08e-76 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g8831 | i0 | 90.991 | 106.107883817427 | 222 | 16 | 91 | 4 | 20 | 239 | 558741 | 558522 | Gemmata sp. SH-PL17, complete genome | blastn | 25572 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 24598045 | 24598045 | PRJNA285816_S_NODE_16320_length_194_cov_1.096552_g16218_i0 | PRJNA285816 | 16320 | 194 | 1.096552 | 2.12731088 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 231 | 2e-56 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g16218 | i0 | 88.205 | 96.4072164948454 | 195 | 21 | 100 | 2 | 1 | 194 | 1729153 | 1728960 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 18703 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24598266 | 24598266 | PRJNA285816_S_NODE_7120_length_264_cov_2.283721_g7018_i0 | PRJNA285816 | 7120 | 264 | 2.283721 | 6.02902344 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 287 | 6.07e-73 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g7018 | i0 | 86.232 | 44.9015151515151 | 276 | 24 | 100 | 8 | 1 | 264 | 2020310 | 2020037 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 11854 | 287 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;