RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA285816" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA285816 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
372023 372023 PRJNA285816_S_NODE_23661_length_169_cov_2.166667_g23559_i0 PRJNA285816 23661 169 2.166667 3.66166723 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 2.34e-5   NTclustered gi|2794961090|ref|XM_067872496.1| 2049356 g23559 i0 100 0.195266272189349 33 0 20 0 37 69 832 864 Monocercomonoides exilis putative Protein kinase domain (MONOS_2570), partial mRNA blastn 33 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
10575823 10575823 PRJNA285816_S_NODE_12069_length_216_cov_0.928144_g11967_i0 PRJNA285816 12069 216 0.928144 2.00479104 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 1.14e-4   NTclustered gi|2794968903|ref|XM_067864552.1| 2049356 g11967 i0 92.857 0.333333333333333 42 2 19 1 39 80 1037 997 Monocercomonoides exilis uncharacterized protein (MONOS_11975), partial mRNA blastn 72 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16949227 16949227 PRJNA285816_S_NODE_11014_length_223_cov_1.241379_g10912_i0 PRJNA285816 11014 223 1.241379 2.76827517 Paratrimastix eleionoma 1709329 Preaxostyla other_Eukaryota 75 4.23e-9   NTclustered gi|2443275956|gb|OP718926.1| 1709329 g10912 i0 91.071 1.1838565022421501 56 4 25 1 28 82 490 545 Paratrimastix eleionoma 60S ribosomal protein L9 mRNA, complete cds blastn 264 75 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;