RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA283169" and tax_phylum = "Cressdnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA283169 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646620 1646620 PRJNA283169_S_NODE_1562_length_220_cov_0.140351_g1548_i0 PRJNA283169 1562 220 0.140351 0.3087722 Fish-associated parvo-like hybrid virus 3003968 Viruses Viruses 187 5.12e-43   NTclustered gi|2015373061|gb|MW046496.1| 3003968 g1548 i0 82.569 1.96818181818182 218 32 98 6 1 215 877 663 MAG: Grus japonensis parvo-like hybrid virus isolate cra70par052 genomic sequence, sequence blastn 433 187 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Fish-associated parvo-like hybrid virus
5475231 5475231 PRJNA283169_S_NODE_2065_length_197_cov_0.108108_g2051_i0 PRJNA283169 2065 197 0.108108 0.21297276 Fish-associated parvo-like hybrid virus 3003968 Viruses Viruses 239 1.22e-58   NTclustered gi|2015373061|gb|MW046496.1| 3003968 g2051 i0 92.262 1.61928934010152 168 13 85 0 2 169 450 617 MAG: Grus japonensis parvo-like hybrid virus isolate cra70par052 genomic sequence, sequence blastn 319 239 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Fish-associated parvo-like hybrid virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;