RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA283169" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA283169 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371822 371822 PRJNA283169_P_NODE_961_length_397_cov_1.252874_g899_i0 PRJNA283169 961 397 1.252874 4.97390978 Nausithoe rubra 168762 Cnidaria other_Eukaryota 139 2.84e-28   NTclustered gi|66864835|gb|AY920776.1| 168762 g899 i0 91.176 1.76574307304786 102 9 26 0 3 104 1366 1467 Nausithoe rubra large subunit 28S ribosomal RNA gene, partial sequence blastn 701 139 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Coronatae Nausithoidae Nausithoe Nausithoe rubra
1646623 1646623 PRJNA283169_S_NODE_3482_length_161_cov_0.857143_g3468_i0 PRJNA283169 3482 161 0.857143 1.38000023 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 78.7 2.21e-10   NTclustered gi|2782896459|ref|XM_067067483.1| 252671 g3468 i0 95.833 0.900621118012422 48 2 30 0 21 68 483 436 PREDICTED: Clytia hemisphaerica procathepsin L-like (LOC136810899), mRNA blastn 145 78.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
14400820 14400820 PRJNA283169_S_NODE_1932_length_202_cov_1.588235_g1918_i0 PRJNA283169 1932 202 1.588235 3.2082347 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 141 3.65e-29   NTclustered gi|2729089548|ref|XM_065207423.1| 499914 g1918 i0 88.696 7.87623762376238 115 13 57 0 85 199 138 252 PREDICTED: Rhopilema esculentum tubulin alpha-1 chain (LOC135690017), transcript variant X3, mRNA blastn 1591 141 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;