RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA283169" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA283169 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646598 1646598 PRJNA283169_P_NODE_6802_length_167_cov_0.872881_g6739_i0 PRJNA283169 6802 167 0.872881 1.45771127 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 237 3.599999999999999e-58   NTclustered gi|2258865392|gb|CP060227.1| 2052152 g6739 i0 92.216 28.9041916167665 167 13 100 0 1 167 431413 431247 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-22 chromosome, complete genome blastn 4827 237 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
8025034 8025034 PRJNA283169_P_NODE_2907_length_243_cov_1.582474_g2844_i0 PRJNA283169 2907 243 1.582474 3.84541182 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 117 7.6600000000000005e-22   NTclustered gi|1958002018|gb|CP064958.1| 2052152 g2844 i0 93.671 0.473251028806584 79 4 33 1 53 131 254865 254788 MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome blastn 115 117 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
18223498 18223498 PRJNA283169_P_NODE_8235_length_157_cov_2.388889_g8172_i0 PRJNA283169 8235 157 2.388889 3.75055573 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 104 3.53e-18   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g8172 i0 95.385 7.51592356687898 65 3 41 0 1 65 125420 125356 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 1180 104 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;