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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA283169" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA283169 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5475233 5475233 PRJNA283169_S_NODE_245_length_508_cov_1.906318_g232_i0 PRJNA283169 245 508 1.906318 9.68409544 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 704 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g232 i0 99.483 26.2972440944882 387 2 76 0 122 508 1238 852 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 13359 704 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
6749519 6749519 PRJNA283169_S_NODE_586_length_332_cov_1.904594_g572_i0 PRJNA283169 586 332 1.904594 6.32325208 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 455 2.04e-123   NTclustered gi|53829555|gb|AY582830.1| 289359 g572 i0 98.084 85.9849397590361 261 5 79 0 72 332 5 265 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 28547 455 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
8025069 8025069 PRJNA283169_P_NODE_6007_length_175_cov_1.174603_g5944_i0 PRJNA283169 6007 175 1.174603 2.05555525 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.89e-6   NTclustered gi|915125186|ref|XM_013478403.1| 5804 g5944 i0 90 1.94285714285714 50 5 29 0 89 138 1059 1108 Eimeria maxima phosphatidylinositol 3-and 4-kinase domain-containing protein, putative partial mRNA blastn 340 65.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
8711672 8711672 PRJNA283169_S_NODE_1847_length_206_cov_0.267516_g1833_i0 PRJNA283169 1847 206 0.267516 0.55108296 Ulnaria 426668 SAR_Eukaryotes SAR_Eukaryotes 340 3.429999999999999e-89   NTclustered gi|187957792|emb|AM497727.1| 426669 g1833 i0 100 89.3203883495146 184 0 89 0 12 195 1613 1430 Synedra ulna 18S rRNA gene, strain AtFULN1 blastn 18400 340 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Licmophorales Ulnariaceae Ulnaria Ulnaria ulna
8711675 8711675 PRJNA283169_S_NODE_3267_length_164_cov_0.191304_g3253_i0 PRJNA283169 3267 164 0.191304 0.31373856 Naviculales 38748 SAR_Eukaryotes SAR_Eukaryotes 241 2.72e-59   NTclustered gi|146762526|gb|EF553458.1| 2850 g3253 i0 94.268 94.8963414634146 157 9 96 0 1 157 3912 4068 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15563 241 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
10575774 10575774 PRJNA283169_S_NODE_1249_length_242_cov_1.808290_g1235_i0 PRJNA283169 1249 242 1.80829 4.3760618 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 436 5.1499999999999985e-118   NTclustered gi|53829589|gb|AY582847.1| 289359 g1235 i0 99.174 89.6611570247934 242 2 100 0 1 242 395 636 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 actin gene, partial cds blastn 21698 436 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
14400744 14400744 PRJNA283169_P_NODE_2512_length_260_cov_2.862559_g2450_i0 PRJNA283169 2512 260 2.862559 7.4426534 Lembadion sp. FG-2015 1607877 SAR_Eukaryotes SAR_Eukaryotes 348 2.7e-91   NTclustered gi|759083556|gb|KM222173.1| 1607877 g2450 i0 98.969 73.0153846153846 194 2 75 0 45 238 370 177 Lembadion sp. FG-2015 voucher FYB2013031305 large subunit ribosomal RNA gene, partial sequence blastn 18984 348 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Lembadionidae Lembadion Lembadion sp. FG-2015
14400755 14400755 PRJNA283169_P_NODE_3132_length_234_cov_1.891892_g3069_i0 PRJNA283169 3132 234 1.891892 4.42702728 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|156101218|ref|XM_001616253.1| 5855 g3069 i0 100 0.11965811965812 28 0 12 0 69 96 1305 1332 Plasmodium vivax transmembrane amino acid transporter protein, putative (PVX_114575), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
15086600 15086600 PRJNA283169_P_NODE_3812_length_214_cov_0.878788_g3749_i0 PRJNA283169 3812 214 0.878788 1.88060632 Lembadion 54107 SAR_Eukaryotes SAR_Eukaryotes 313 7.83e-81   NTclustered gi|7839503|gb|AF255358.1| 54108 g3749 i0 98.857 83.3271028037383 175 2 100 0 1 175 373 199 Lembadion bullinum small subunit ribosomal RNA gene, partial sequence blastn 17832 313 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Lembadionidae Lembadion Lembadion bullinum
18223505 18223505 PRJNA283169_S_NODE_2295_length_188_cov_1.050360_g2281_i0 PRJNA283169 2295 188 1.05036 1.9746768 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 276 8.780000000000001e-70   NTclustered gi|300676719|gb|GQ377693.1| 151077 g2281 i0 93.085 2.91489361702128 188 13 100 0 1 188 67 254 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 548 276 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
18910431 18910431 PRJNA283169_P_NODE_7055_length_166_cov_0.880342_g6992_i0 PRJNA283169 7055 166 0.880342 1.46136772 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 268 1.27e-67   NTclustered gi|946969524|gb|KP400274.1| 2850 g6992 i0 98.065 93.3734939759036 155 2 93 1 12 166 260 413 Phaeodactylum tricornutum strain ROS_KABB1 18S ribosomal RNA gene, partial sequence blastn 15500 268 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
20773315 20773315 PRJNA283169_S_NODE_1377_length_232_cov_0.147541_g1363_i0 PRJNA283169 1377 232 0.147541 0.34229512 Ulnaria ulna 426669 SAR_Eukaryotes SAR_Eukaryotes 416 6.389999999999998e-112   NTclustered gi|2579686273|ref|NC_082433.1| 426669 g1363 i0 99.563 195.711206896552 229 0 98 1 5 232 66974 67202 Ulnaria ulna chloroplast, complete genome blastn 45405 416 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Licmophorales Ulnariaceae Ulnaria Ulnaria ulna
20773319 20773319 PRJNA283169_S_NODE_477_length_363_cov_3.156051_g463_i0 PRJNA283169 477 363 3.156051 11.45646513 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 665 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g463 i0 99.725 49.4325068870523 363 1 100 0 1 363 844 482 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 17944 665 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
22048310 22048310 PRJNA283169_S_NODE_558_length_338_cov_1.328720_g544_i0 PRJNA283169 558 338 1.32872 4.4910736 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 189 2.33e-43   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g544 i0 80.913 12.7751479289941 241 44 71 2 19 258 366 127 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 4318 189 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
22735824 22735824 PRJNA283169_S_NODE_1198_length_247_cov_0.095960_g1184_i0 PRJNA283169 1198 247 0.09596 0.2370212 Ulnaria 426668 SAR_Eukaryotes SAR_Eukaryotes 451 1.88e-122   NTclustered gi|2579686273|ref|NC_082433.1| 426669 g1184 i0 99.595 199.939271255061 247 1 100 0 1 247 65626 65872 Ulnaria ulna chloroplast, complete genome blastn 49385 451 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Licmophorales Ulnariaceae Ulnaria Ulnaria ulna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;