contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA283169" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 371804 | 371804 | PRJNA283169_P_NODE_6441_length_169_cov_1.016667_g6378_i0 | PRJNA283169 | 6441 | 169 | 1.016667 | 1.71816723 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 158 | 2.91e-34 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g6378 | i0 | 90.678 | 215.201183431953 | 118 | 11 | 70 | 0 | 6 | 123 | 3454591 | 3454708 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 36369 | 158 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 2922427 | 2922427 | PRJNA283169_P_NODE_4403_length_201_cov_1.210526_g4340_i0 | PRJNA283169 | 4403 | 201 | 1.210526 | 2.43315726 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 355 | 1.19e-93 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g4340 | i0 | 98.507 | 290.338308457711 | 201 | 3 | 100 | 0 | 1 | 201 | 1321144 | 1320944 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 58358 | 355 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 3609536 | 3609536 | PRJNA283169_P_NODE_5463_length_183_cov_1.141791_g5400_i0 | PRJNA283169 | 5463 | 183 | 1.141791 | 2.08947753 | Methylacidiphilum (ex Ratnadevi et al. 2023) | 511745 | Bacteria | Bacteria | 209 | 8.74e-50 | NTclustered | gi|189184875|gb|CP000975.1| | 481448 | g5400 | i0 | 87.845 | 112.595628415301 | 181 | 18 | 98 | 4 | 1 | 179 | 894475 | 894297 | Methylacidiphilum infernorum V4, complete genome | blastn | 20605 | 209 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Methylacidiphilaceae | Methylacidiphilum (ex Ratnadevi et al. 2023) | Candidatus Methylacidiphilum infernorum | |
| 5475228 | 5475228 | PRJNA283169_P_NODE_885_length_412_cov_1.878788_g823_i0 | PRJNA283169 | 885 | 412 | 1.878788 | 7.74060656 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 588 | 2.4399999999999994e-163 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g823 | i0 | 98.788 | 101.507281553398 | 330 | 4 | 100 | 0 | 1 | 330 | 319633 | 319962 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 41821 | 588 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 6749435 | 6749435 | PRJNA283169_P_NODE_1666_length_314_cov_1.132075_g1604_i0 | PRJNA283169 | 1666 | 314 | 1.132075 | 3.5547155 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 348 | 3.35e-91 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g1604 | i0 | 86.901 | 315.433121019108 | 313 | 38 | 99 | 2 | 2 | 314 | 27876 | 28185 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 99046 | 348 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 9987119 | 9987119 | PRJNA283169_P_NODE_6328_length_170_cov_1.446281_g6265_i0 | PRJNA283169 | 6328 | 170 | 1.446281 | 2.4586777 | Parachlamydia | 83551 | Bacteria | Bacteria | 268 | 1.3e-67 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g6265 | i0 | 95.294 | 253.894117647059 | 170 | 7 | 100 | 1 | 1 | 170 | 453 | 621 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 43162 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 10575707 | 10575707 | PRJNA283169_P_NODE_269_length_801_cov_4.973404_g217_i0 | PRJNA283169 | 269 | 801 | 4.973404 | 39.83696604 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g217 | i0 | 88.073 | 279.205992509363 | 763 | 84 | 95 | 6 | 2 | 762 | 4718743 | 4717986 | Luteolibacter sp. SL250 chromosome | blastn | 223644 | 898 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 10575720 | 10575720 | PRJNA283169_P_NODE_3689_length_216_cov_1.730539_g3626_i0 | PRJNA283169 | 3689 | 216 | 1.730539 | 3.73796424 | Caulifigura coniformis | 2527983 | Bacteria | Bacteria | 267 | 6.25e-67 | NTclustered | gi|1712508784|gb|CP036271.1| | 2527983 | g3626 | i0 | 88.889 | 15.8935185185185 | 216 | 24 | 100 | 0 | 1 | 216 | 2926057 | 2926272 | Caulifigura coniformis strain Pan44 chromosome | blastn | 3433 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Caulifigura | Caulifigura coniformis | |
| 13125622 | 13125622 | PRJNA283169_P_NODE_5491_length_182_cov_1.563910_g5428_i0 | PRJNA283169 | 5491 | 182 | 1.56391 | 2.8463162 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 335 | 1.3699999999999997e-87 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g5428 | i0 | 100 | 274.56043956044 | 181 | 0 | 99 | 0 | 1 | 181 | 456786 | 456606 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 49970 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 14400807 | 14400807 | PRJNA283169_P_NODE_7052_length_166_cov_0.880342_g6989_i0 | PRJNA283169 | 7052 | 166 | 0.880342 | 1.46136772 | Luteolibacter sp. LG18 | 2819286 | Bacteria | Bacteria | 219 | 1.3e-52 | NTclustered | gi|2585939279|dbj|AP024600.1| | 2819286 | g6989 | i0 | 90.419 | 47.3493975903614 | 167 | 14 | 100 | 2 | 1 | 166 | 2216675 | 2216840 | Luteolibacter sp. LG18 DNA, complete genome | blastn | 7860 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. LG18 | |
| 15674480 | 15674480 | PRJNA283169_P_NODE_3733_length_215_cov_1.548193_g3670_i0 | PRJNA283169 | 3733 | 215 | 1.548193 | 3.32861495 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 296 | 7.93e-76 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g3670 | i0 | 93.171 | 111.125581395349 | 205 | 9 | 93 | 4 | 1 | 201 | 7051628 | 7051425 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 23892 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 16361484 | 16361484 | PRJNA283169_P_NODE_5773_length_178_cov_1.310078_g5710_i0 | PRJNA283169 | 5773 | 178 | 1.310078 | 2.33193884 | root | 1 | Root_unresolved | Root_unresolved | 329 | 6.21e-86 | NTclustered | gi|1774728408|gb|MN684281.1| | 2736 | g5710 | i0 | 100 | 99.9550561797753 | 178 | 0 | 100 | 0 | 1 | 178 | 716 | 539 | Verrucomicrobium spinosum strain MT_SG_E_24_27F.27F 16S ribosomal RNA gene, partial sequence | blastn | 17792 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 16949152 | 16949152 | PRJNA283169_P_NODE_3954_length_211_cov_0.950617_g3891_i0 | PRJNA283169 | 3954 | 211 | 0.950617 | 2.00580187 | Caulifigura coniformis | 2527983 | Bacteria | Bacteria | 346 | 7.59e-91 | NTclustered | gi|1712508784|gb|CP036271.1| | 2527983 | g3891 | i0 | 96.226 | 127.293838862559 | 212 | 6 | 100 | 2 | 1 | 211 | 2926655 | 2926865 | Caulifigura coniformis strain Pan44 chromosome | blastn | 26859 | 346 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Caulifigura | Caulifigura coniformis | |
| 18910419 | 18910419 | PRJNA283169_P_NODE_2495_length_261_cov_2.066038_g2433_i0 | PRJNA283169 | 2495 | 261 | 2.066038 | 5.39235918 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 200 | 8.029999999999999e-47 | NTclustered | gi|2240218473|gb|CP097283.1| | 239935 | g2433 | i0 | 82.609 | 264.275862068966 | 230 | 37 | 88 | 3 | 33 | 261 | 339980 | 339753 | Akkermansia muciniphila strain NB2A-8-WC chromosome | blastn | 68976 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 19497694 | 19497694 | PRJNA283169_P_NODE_2456_length_263_cov_1.836449_g2394_i0 | PRJNA283169 | 2456 | 263 | 1.836449 | 4.82986087 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 372 | 1.62e-98 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g2394 | i0 | 92.636 | 17.6235741444867 | 258 | 19 | 98 | 0 | 1 | 258 | 5062908 | 5063165 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 4635 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 20773289 | 20773289 | PRJNA283169_P_NODE_6257_length_171_cov_1.557377_g6194_i0 | PRJNA283169 | 6257 | 171 | 1.557377 | 2.66311467 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 217 | 4.8e-52 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g6194 | i0 | 89.595 | 134.631578947368 | 173 | 14 | 99 | 4 | 2 | 171 | 7051977 | 7051806 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 23022 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 23323804 | 23323804 | PRJNA283169_P_NODE_2859_length_245_cov_2.081633_g2796_i0 | PRJNA283169 | 2859 | 245 | 2.081633 | 5.10000085 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 342 | 1.17e-89 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g2796 | i0 | 91.903 | 151.391836734694 | 247 | 17 | 100 | 2 | 1 | 245 | 7051862 | 7052107 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 37091 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 24597889 | 24597889 | PRJNA283169_P_NODE_4680_length_196_cov_1.061224_g4617_i0 | PRJNA283169 | 4680 | 196 | 1.061224 | 2.07999904 | Gimesia panareensis | 2527978 | Bacteria | Bacteria | 82.4 | 2.16e-11 | NTclustered | gi|1712615819|gb|CP036277.1| | 2527978 | g4617 | i0 | 92.857 | 2.20918367346939 | 56 | 4 | 29 | 0 | 28 | 83 | 2381233 | 2381178 | Gimesia panareensis strain Pan110 chromosome, complete genome | blastn | 433 | 82.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gimesia | Gimesia panareensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;