contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA283169" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1646598 | 1646598 | PRJNA283169_P_NODE_6802_length_167_cov_0.872881_g6739_i0 | PRJNA283169 | 6802 | 167 | 0.872881 | 1.45771127 | Candidatus Nomurabacteria bacterium | 2052152 | Bacteria | Bacteria | 237 | 3.599999999999999e-58 | NTclustered | gi|2258865392|gb|CP060227.1| | 2052152 | g6739 | i0 | 92.216 | 28.9041916167665 | 167 | 13 | 100 | 0 | 1 | 167 | 431413 | 431247 | MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-22 chromosome, complete genome | blastn | 4827 | 237 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Nomuraibacteriota | Candidatus Nomurabacteria bacterium | ||||||
| 8025034 | 8025034 | PRJNA283169_P_NODE_2907_length_243_cov_1.582474_g2844_i0 | PRJNA283169 | 2907 | 243 | 1.582474 | 3.84541182 | Candidatus Nomurabacteria bacterium | 2052152 | Bacteria | Bacteria | 117 | 7.6600000000000005e-22 | NTclustered | gi|1958002018|gb|CP064958.1| | 2052152 | g2844 | i0 | 93.671 | 0.473251028806584 | 79 | 4 | 33 | 1 | 53 | 131 | 254865 | 254788 | MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome | blastn | 115 | 117 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Nomuraibacteriota | Candidatus Nomurabacteria bacterium | ||||||
| 10575740 | 10575740 | PRJNA283169_P_NODE_5669_length_180_cov_1.106870_g5606_i0 | PRJNA283169 | 5669 | 180 | 1.10687 | 1.992366 | Candidatus Roizmanbacteria bacterium | 2282149 | Bacteria | Bacteria | 270 | 3.87e-68 | NTclustered | gi|1958015594|gb|CP064967.1| | 2282149 | g5606 | i0 | 94.35 | 1.22777777777778 | 177 | 8 | 100 | 2 | 1 | 176 | 911893 | 912068 | MAG: Candidatus Roizmanbacteria bacterium isolate Damh_18-Q3-R51-60_BAT3C.63_uni chromosome, complete genome | blastn | 221 | 270 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Roizmaniibacteriota | Candidatus Roizmanbacteria bacterium | ||||||
| 11850435 | 11850435 | PRJNA283169_P_NODE_4970_length_191_cov_1.415493_g4907_i0 | PRJNA283169 | 4970 | 191 | 1.415493 | 2.70359163 | Candidatus Kaiserbacteria bacterium | 2030810 | Bacteria | Bacteria | 62.1 | 2.73e-5 | NTclustered | gi|2874253687|emb|OY969413.1| | 2030810 | g4907 | i0 | 91.304 | 0.240837696335079 | 46 | 3 | 24 | 1 | 136 | 180 | 367583 | 367628 | MAG: Candidatus Kaiserbacteria bacterium isolate MFD01223.bin.1.23 genome assembly, chromosome: 1 | blastn | 46 | 62.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Kaiseribacteriota | Candidatus Kaiserbacteria bacterium | ||||||
| 16949192 | 16949192 | PRJNA283169_S_NODE_3074_length_167_cov_0.152542_g3060_i0 | PRJNA283169 | 3074 | 167 | 0.152542 | 0.25474514 | Candidatus Giovannonibacteria bacterium | 2053557 | Bacteria | Bacteria | 102 | 1.37e-17 | NTclustered | gi|1950811264|gb|CP066687.1| | 2053557 | g3060 | i0 | 86.316 | 32.8982035928144 | 95 | 11 | 76 | 2 | 75 | 167 | 310136 | 310042 | MAG: Candidatus Giovannonibacteria bacterium isolate NC_groundwater_467_Ag_B-0.1um_47_26 chromosome | blastn | 5494 | 102 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Giovannoniibacteriota | Candidatus Giovannonibacteria bacterium | ||||||
| 18223498 | 18223498 | PRJNA283169_P_NODE_8235_length_157_cov_2.388889_g8172_i0 | PRJNA283169 | 8235 | 157 | 2.388889 | 3.75055573 | Candidatus Nomurabacteria bacterium | 2052152 | Bacteria | Bacteria | 104 | 3.53e-18 | NTclustered | gi|1958028780|gb|CP064973.1| | 2052152 | g8172 | i0 | 95.385 | 7.51592356687898 | 65 | 3 | 41 | 0 | 1 | 65 | 125420 | 125356 | MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome | blastn | 1180 | 104 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Nomuraibacteriota | Candidatus Nomurabacteria bacterium | ||||||
| 23323810 | 23323810 | PRJNA283169_P_NODE_3459_length_223_cov_1.160920_g3396_i0 | PRJNA283169 | 3459 | 223 | 1.16092 | 2.5888516 | Candidatus Woesebacteria bacterium | 2026804 | Bacteria | Bacteria | 145 | 3.18e-30 | NTclustered | gi|1950815156|gb|CP066686.1| | 2026804 | g3396 | i0 | 82.941 | 0.762331838565022 | 170 | 20 | 74 | 5 | 9 | 174 | 767875 | 768039 | MAG: Candidatus Woesebacteria bacterium isolate NC_groundwater_442_Ag_B-0.1um_40_41 chromosome | blastn | 170 | 145 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Woeseibacteriota | Candidatus Woesebacteria bacterium | ||||||
| 24597938 | 24597938 | PRJNA283169_P_NODE_7980_length_162_cov_1.353982_g7917_i0 | PRJNA283169 | 7980 | 162 | 1.353982 | 2.19345084 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 93.5 | 7.94e-15 | NTclustered | gi|2556885218|gb|CP129471.1| | 2052139 | g7917 | i0 | 91.176 | 0.419753086419753 | 68 | 6 | 42 | 0 | 7 | 74 | 316718 | 316785 | MAG: Patescibacteria group bacterium isolate cMAG.25 chromosome, complete genome | blastn | 68 | 93.5 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;