RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA280983" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA280983 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371645 371645 PRJNA280983_P_NODE_1_length_8300_cov_29.676160_g0_i0 PRJNA280983 1 8300 29.67616 2463.12128 Zebrafish picornavirus 1 2304617 Viruses Viruses 11703 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g0 i0 99.921 3.0544578313253 6354 2 99 1 1902 8252 1874 8227 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 25352 11703 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
1646439 1646439 PRJNA280983_P_NODE_2322_length_465_cov_14.980769_g2209_i0 PRJNA280983 2322 465 14.980769 69.66057585 brine shrimp yue-like virus 7 2900459 Viruses Viruses 780 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g2209 i0 98.858 4.70967741935484 438 4 94 1 1 438 2181 2617 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 2190 780 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
1646445 1646445 PRJNA280983_P_NODE_3522_length_361_cov_8.323718_g3407_i0 PRJNA280983 3522 361 8.323718 30.04862198 brine shrimp yue-like virus 7 2900459 Viruses Viruses 606 5.819999999999997e-169   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g3407 i0 99.698 4.58448753462604 331 1 92 0 31 361 862 532 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1655 606 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
8024944 8024944 PRJNA280983_P_NODE_4447_length_312_cov_4.159696_g4332_i0 PRJNA280983 4447 312 4.159696 12.97825152 brine shrimp yue-like virus 7 2900459 Viruses Viruses 510 4e-140   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g4332 i0 99.642 4.47115384615385 279 1 89 0 34 312 6130 6408 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1395 510 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
8024960 8024960 PRJNA280983_P_NODE_7807_length_202_cov_1.267974_g7692_i0 PRJNA280983 7807 202 1.267974 2.56130748 Caudoviricetes sp. 2832643 Viruses Viruses 374 3.3e-99   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g7692 i0 100 1 202 0 100 0 1 202 20132 20333 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 202 374 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12537476 12537476 PRJNA280983_P_NODE_10270_length_165_cov_0.879310_g10155_i0 PRJNA280983 10270 165 0.87931 1.4508615 Pahexavirus 1982251 Viruses Viruses 283 4.4899999999999995e-72   NTclustered gi|543171540|ref|NC_022340.1| 1235656 g10155 i0 97.576 100.030303030303 165 4 100 0 1 165 5224 5388 Propionibacterium phage PHL114L00, complete genome blastn 16505 283 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus PHL114L00
22048127 22048127 PRJNA280983_P_NODE_1598_length_584_cov_2.942056_g1488_i0 PRJNA280983 1598 584 2.942056 17.18160704 brine shrimp reovirus 1 2900474 Viruses Viruses 1062 0   NTclustered gi|2209095661|gb|OL472736.1| 2900474 g1488 i0 99.486 20.9948630136986 584 3 100 0 1 584 3004 2421 MAG: Brine shrimp reovirus 1 isolate SC/15 segment 3 hypothetical protein gene, complete cds blastn 12261 1062 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     brine shrimp reovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;