RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA280983" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA280983 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2922336 2922336 PRJNA280983_P_NODE_8083_length_196_cov_3.142857_g7968_i0 PRJNA280983 8083 196 3.142857 6.15999972 Melampsora laricis-populina 203908 Fungi Fungi 172 1.25e-38   NTclustered gi|599417498|ref|XM_007415505.1| 747676 g7968 i0 86.538 0.795918367346939 156 21 80 0 16 171 1774 1929 Melampsora larici-populina 98AG31 uncharacterized protein (MELLADRAFT_39282), partial mRNA blastn 156 172 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Melampsoraceae Melampsora Melampsora laricis-populina
9299753 9299753 PRJNA280983_P_NODE_8268_length_192_cov_8.188811_g8153_i0 PRJNA280983 8268 192 8.188811 15.72251712 Austropuccinia psidii 181123 Fungi Fungi 117 5.78e-22   NTclustered gi|1714236393|ref|NC_044121.1| 181123 g8153 i0 93.59 3.25520833333333 78 5 41 0 1 78 80503 80580 Austropuccinia psidii isolate MF-1 mitochondrion, complete genome blastn 625 117 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Sphaerophragmiaceae Austropuccinia Austropuccinia psidii
10575620 10575620 PRJNA280983_P_NODE_6669_length_230_cov_1.734807_g6554_i0 PRJNA280983 6669 230 1.734807 3.9900561 Hemileia vastatrix 203904 Fungi Fungi 375 1.07e-99   NTclustered gi|410026026|gb|JX569483.1| 203904 g6554 i0 98.585 0.921739130434783 212 3 92 0 1 212 8251 8462 Hemileia vastatrix clone HvCat_contig_124130 retrotransposon Gypsy-like, complete sequence blastn 212 375 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Zaghouaniaceae Hemileia Hemileia vastatrix
14400664 14400664 PRJNA280983_P_NODE_5712_length_259_cov_0.752381_g5597_i0 PRJNA280983 5712 259 0.752381 1.94866679 Malassezia restricta 76775 Fungi Fungi 435 2e-117   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g5597 i0 96.911 98.2779922779923 259 8 100 0 1 259 1915 1657 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 25454 435 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15674376 15674376 PRJNA280983_P_NODE_5953_length_251_cov_0.975248_g5838_i0 PRJNA280983 5953 251 0.975248 2.44787248 Kwoniella europaea 1247712 Fungi Fungi 219 2.1199999999999998e-52   NTclustered gi|2753006648|ref|XM_066229347.1| 1423913 g5838 i0 83.843 52.3625498007968 229 37 91 0 21 249 114 342 Kwoniella europaea PYCC6329 histone H3 (V865_005578), partial mRNA blastn 13143 219 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella europaea
16949031 16949031 PRJNA280983_P_NODE_5454_length_268_cov_0.831050_g5339_i0 PRJNA280983 5454 268 0.83105 2.227214 Punctularia strigosozonata 202698 Fungi Fungi 267 8.05e-67   NTclustered gi|599121089|ref|XM_007387654.1| 741275 g5339 i0 84.871 99.0298507462687 271 33 99 3 2 268 431 697 Punctularia strigosozonata HHB-11173 SS5 glyceraldehyde-3-phosphate dehydrogenase (PUNSTDRAFT_47090), partial mRNA blastn 26540 267 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Corticiales Punctulariaceae Punctularia Punctularia strigosozonata
20773119 20773119 PRJNA280983_P_NODE_10957_length_163_cov_0.894737_g10842_i0 PRJNA280983 10957 163 0.894737 1.45842131 Malassezia globosa 76773 Fungi Fungi 159 7.779999999999998e-35   NTclustered gi|164656676|ref|XM_001729414.1| 425265 g10842 i0 86.503 1 163 0 100 1 1 163 57 197 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3501), partial mRNA blastn 163 159 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;