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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA278119" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA278119 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8024436 8024436 PRJNA278119_P_NODE_18127_length_240_cov_1.633508_g17878_i0 PRJNA278119 18127 240 1.633508 3.9204192 Mizuhopecten yessoensis 6573 Mollusca Mollusca 444 3.05e-120   NTclustered gi|28415639|dbj|AB103394.1| 6573 g17878 i0 100 13.070833333333301 240 0 100 0 1 240 472 233 Mizuhopecten yessoensis mitochondrial gene for 16S rRNA, partial sequence blastn 3137 444 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
9299333 9299333 PRJNA278119_P_NODE_2688_length_745_cov_2.063218_g2465_i0 PRJNA278119 2688 745 2.063218 15.3709741 Mercenaria mercenaria 6596 Mollusca Mollusca 54.7 0.021   NTclustered gi|2442051363|ref|XM_045339644.2| 6596 g2465 i0 94.444 0.14496644295302 36 0 5 2 33 66 7714 7679 PREDICTED: Mercenaria mercenaria PR domain zinc finger protein 1-like (LOC123551033), transcript variant X2, mRNA blastn 108 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
13124832 13124832 PRJNA278119_P_NODE_11211_length_345_cov_42.652027_g10964_i0 PRJNA278119 11211 345 42.652027 147.14949315 Bradybaena similaris 145626 Mollusca Mollusca 230 1.4099999999999995e-55   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g10964 i0 81.72 5.31594202898551 279 48 81 3 43 321 55579207 55579482 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 1834 230 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
14399986 14399986 PRJNA278119_P_NODE_11272_length_344_cov_2.267797_g11025_i0 PRJNA278119 11272 344 2.267797 7.80122168 Ostrea edulis 37623 Mollusca Mollusca 176 1.85e-39   NTclustered gi|2507342384|ref|XM_048896550.2| 37623 g11025 i0 80 6.92441860465116 250 40 71 9 99 343 137 381 PREDICTED: Ostrea edulis serine/threonine-protein phosphatase 4 catalytic subunit (LOC125664049), transcript variant X1, mRNA blastn 2382 176 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
20772825 20772825 PRJNA278119_P_NODE_35357_length_169_cov_0.866667_g35108_i0 PRJNA278119 35357 169 0.866667 1.46466723 Mizuhopecten yessoensis 6573 Mollusca Mollusca 255 1e-63   NTclustered gi|1207982408|ref|XM_021485099.1| 6573 g35108 i0 94.083 10.4023668639053 169 9 100 1 1 169 975 808 PREDICTED: Mizuhopecten yessoensis putative uncharacterized protein YghX (LOC110441835), transcript variant X1, mRNA blastn 1758 255 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
20772899 20772899 PRJNA278119_P_NODE_41297_length_165_cov_1.344828_g41048_i0 PRJNA278119 41297 165 1.344828 2.2189662 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.014   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g41048 i0 100 0.16969696969697 28 0 17 0 15 42 25718586 25718559 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20772954 20772954 PRJNA278119_P_NODE_4577_length_562_cov_1.475634_g4334_i0 PRJNA278119 4577 562 1.475634 8.29306308 Mizuhopecten yessoensis 6573 Mollusca Mollusca 1033 0   NTclustered gi|2088231943|ref|NC_056622.1| 6573 g4334 i0 99.822 53.9928825622776 562 1 100 0 1 562 5378 5939 Mizuhopecten yessoensis mitochondrion, complete genome blastn 30344 1033 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
22047541 22047541 PRJNA278119_P_NODE_13578_length_303_cov_1.090551_g13330_i0 PRJNA278119 13578 303 1.090551 3.3043695300000002 Bradybaena similaris 145626 Mollusca Mollusca 67.6 1.01e-6   NTclustered gi|2912985489|dbj|AP039590.1| 145626 g13330 i0 95.238 6.0990099009901 42 2 14 0 40 81 47316734 47316693 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 9, sequence blastn 1848 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
22047996 22047996 PRJNA278119_P_NODE_47378_length_162_cov_0.920354_g47129_i0 PRJNA278119 47378 162 0.920354 1.49097348 Perna viridis 73031 Mollusca Mollusca 147 6.009999999999999e-31   NTclustered gi|56967588|gb|AY850128.1| 73031 g47129 i0 94.681 0.580246913580247 94 5 58 0 68 161 307 214 Perna viridis clone GM8 microsatellite sequence blastn 94 147 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Perna Perna viridis
23323137 23323137 PRJNA278119_P_NODE_19099_length_231_cov_1.076923_g18850_i0 PRJNA278119 19099 231 1.076923 2.48769213 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g18850 i0 100 0.125541125541126 29 0 13 0 106 134 28741211 28741239 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;