RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA278119" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA278119 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646397 1646397 PRJNA278119_P_NODE_9302_length_385_cov_2.282738_g9055_i0 PRJNA278119 9302 385 2.282738 8.7885413 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 54.7 0.01   NTclustered gi|2729081272|ref|XM_065203100.1| 499914 g9055 i0 100 0.0753246753246753 29 0 8 0 71 99 887 859 PREDICTED: Rhopilema esculentum putative nuclease HARBI1 (LOC135686772), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
4198694 4198694 PRJNA278119_P_NODE_7964_length_420_cov_6.854447_g7717_i0 PRJNA278119 7964 420 6.854447 28.7886774 Sphaeromyxa zaharoni 275449 Cnidaria other_Eukaryota 60.2 2.42e-4   NTclustered gi|2663986569|emb|OY751524.1| 275449 g7717 i0 100 1.58571428571429 32 0 8 0 267 298 6365 6334 Sphaeromyxa zaharoni isolate 24.2.2011 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 666 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa zaharoni
9299087 9299087 PRJNA278119_P_NODE_10648_length_356_cov_2.185668_g10401_i0 PRJNA278119 10648 356 2.185668 7.78097808 Orbicella faveolata 48498 Cnidaria other_Eukaryota 52.8 0.034   NTclustered gi|1176100932|ref|XM_020765523.1| 48498 g10401 i0 100 0.0786516853932584 28 0 8 0 220 247 94 67 PREDICTED: Orbicella faveolata 26S proteasome complex subunit SEM1-like (LOC110058861), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
23323370 23323370 PRJNA278119_P_NODE_34299_length_169_cov_2.141667_g34050_i0 PRJNA278119 34299 169 2.141667 3.61941723 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 73.1 1.08e-8   NTclustered gi|2202637102|ref|XM_046993911.1| 2897299 g34050 i0 83.333 1.67455621301775 78 13 46 0 89 166 655 578 PREDICTED: Xenia sp. Carnegie-2017 ras-related protein ORAB-1-like (LOC124443420), mRNA blastn 283 73.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;