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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA278119" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA278119 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1058882 1058882 PRJNA278119_P_NODE_34641_length_169_cov_1.300000_g34392_i0 PRJNA278119 34641 169 1.3 2.197 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 303 3.53e-78   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g34392 i0 100 26.1656804733728 164 0 97 0 6 169 1397 1234 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 4422 303 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
1646139 1646139 PRJNA278119_P_NODE_3562_length_642_cov_2.500843_g3326_i0 PRJNA278119 3562 642 2.500843 16.05541206 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 1116 0   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g3326 i0 97.981 70.2632398753894 644 11 100 2 1 642 1075 432 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 45109 1116 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
6748796 6748796 PRJNA278119_P_NODE_18706_length_235_cov_0.817204_g18457_i0 PRJNA278119 18706 235 0.817204 1.9204294 Epidinium ecaudatum 300017 SAR_Eukaryotes SAR_Eukaryotes 220 5.46e-53   NTclustered gi|92790181|emb|AJ965276.1| 300017 g18457 i0 85.99 123.034042553191 207 27 90 2 21 226 906 1111 Epidinium ecaudatum partial mRNA for Polyubiqutin 1 (polyubiqutin 1 gene) blastn 28913 220 1 Eukaryota Sar   Ciliophora Litostomatea Entodiniomorphida Ophryoscolecidae Epidinium Epidinium ecaudatum
7436616 7436616 PRJNA278119_P_NODE_10566_length_358_cov_1.996764_g10319_i0 PRJNA278119 10566 358 1.996764 7.14841512 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 230 1.4599999999999995e-55   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10319 i0 97.059 1.13966480446927 136 4 38 0 1 136 2947 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 408 230 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10575143 10575143 PRJNA278119_P_NODE_2089_length_848_cov_2.147685_g1884_i0 PRJNA278119 2089 848 2.147685 18.2123688 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1434 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g1884 i0 97.17 57.8396226415094 848 24 100 0 1 848 2363 1516 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 49048 1434 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
11849970 11849970 PRJNA278119_P_NODE_3550_length_643_cov_6.244108_g3314_i0 PRJNA278119 3550 643 6.244108 40.14961444 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 1062 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3314 i0 96.568 63.0419906687403 641 22 99 0 2 642 650 10 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40536 1062 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11849984 11849984 PRJNA278119_P_NODE_36270_length_168_cov_1.310924_g36021_i0 PRJNA278119 36270 168 1.310924 2.20235232 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 169 1.34e-37   NTclustered gi|829197694|ref|XM_001029851.3| 312017 g36021 i0 85.119 1 168 21 99 2 3 168 572 407 Tetrahymena thermophila SB210 papain family cysteine protease partial mRNA blastn 168 169 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
12537354 12537354 PRJNA278119_P_NODE_32910_length_173_cov_1.258065_g32661_i0 PRJNA278119 32910 173 1.258065 2.17645245 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 254 3.71e-63   NTclustered gi|161734|gb|L01415.1|TETBTUBUA 5911 g32661 i0 93.064 93.4913294797688 173 12 100 0 1 173 674 502 Tetrahymena thermophila beta-tubulin (BTU1) gene, complete cds blastn 16174 254 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
13812166 13812166 PRJNA278119_P_NODE_25451_length_196_cov_1.061224_g25202_i0 PRJNA278119 25451 196 1.061224 2.07999904 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 211 2.64e-50   NTclustered gi|12744902|gb|AF331706.1|AF331706 5911 g25202 i0 86.154 1.98979591836735 195 27 99 0 2 196 1704 1898 Tetrahymena thermophila Ndc1 protein (NDC1) gene, complete cds blastn 390 211 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
13812312 13812312 PRJNA278119_P_NODE_7711_length_428_cov_2.781003_g7464_i0 PRJNA278119 7711 428 2.781003 11.90269284 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 673 0   NTclustered gi|148362050|gb|EF428128.1| 5912 g7464 i0 94.631 105.198598130841 447 2 100 8 1 428 732 289 Tetrahymena tropicalis strain Lahorensis 18S ribosomal RNA gene, partial sequence blastn 45025 678 0.992625368731563 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena tropicalis
15673737 15673737 PRJNA278119_P_NODE_13473_length_304_cov_1.862745_g13225_i0 PRJNA278119 13473 304 1.862745 5.6627448 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 470 6.6e-128   NTclustered gi|10782|emb|X54004.1| 5908 g13225 i0 94.062 53.9835526315789 320 2 99 1 1 303 2976 3295 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 16411 470 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
18910150 18910150 PRJNA278119_P_NODE_19135_length_230_cov_1.784530_g18886_i0 PRJNA278119 19135 230 1.78453 4.104419 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 401 1.7699999999999994e-107   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g18886 i0 98.253 72.0304347826087 229 4 99 0 1 229 2425 2653 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16567 401 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19497267 19497267 PRJNA278119_P_NODE_32096_length_175_cov_1.238095_g31847_i0 PRJNA278119 32096 175 1.238095 2.16666625 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 196 6.44e-46   NTclustered gi|1780512736|gb|MN025427.1| 5909 g31847 i0 86.932 3.16571428571429 176 21 100 2 1 175 6707 6881 Tetrahymena rostrata isolate TRAUS mitochondrion, complete genome blastn 554 196 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
21460502 21460502 PRJNA278119_P_NODE_22157_length_210_cov_1.652174_g21908_i0 PRJNA278119 22157 210 1.652174 3.4695654 root 1 Root_unresolved Root_unresolved 364 2.0799999999999992e-96   NTclustered gi|345541658|gb|JN547815.1| 5911 g21908 i0 98.086 8.37619047619048 209 4 99 0 2 210 3673 3465 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 1759 364 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23323568 23323568 PRJNA278119_P_NODE_5599_length_503_cov_2.222467_g5354_i0 PRJNA278119 5599 503 2.222467 11.17900901 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 464 5.3299999999999997e-126   NTclustered gi|10782|emb|X54004.1| 5908 g5354 i0 99.222 50.9960238568588 257 2 93 0 247 503 1733 1477 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 25651 464 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
24010832 24010832 PRJNA278119_P_NODE_47819_length_160_cov_2.342342_g47570_i0 PRJNA278119 47819 160 2.342342 3.7477472 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 296 5.55e-76   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g47570 i0 100 96.15625 160 0 100 0 1 160 978 1137 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 15385 296 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24597337 24597337 PRJNA278119_P_NODE_25900_length_194_cov_1.365517_g25651_i0 PRJNA278119 25900 194 1.365517 2.64910298 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 209 9.39e-50   NTclustered gi|33327401|gb|AF527986.1| 151077 g25651 i0 96.8 80.6649484536082 125 4 64 0 1 125 26 150 Chilodonella uncinata clone 6 histone H4 (H4) gene, partial cds blastn 15649 209 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;