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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA278119" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA278119 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4198133 4198133 PRJNA278119_P_NODE_12224_length_326_cov_5.469314_g11976_i0 PRJNA278119 12224 326 5.469314 17.82996364 Polychytrium aggregatum 110093 Fungi Fungi 121 8.28e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g11976 i0 84.252 6.58588957055215 127 16 38 3 188 312 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
5474991 5474991 PRJNA278119_P_NODE_9425_length_382_cov_2.075075_g9178_i0 PRJNA278119 9425 382 2.075075 7.9267865 Polychytrium aggregatum 110093 Fungi Fungi 213 1.58e-50   NTclustered gi|2432142886|ref|XM_053110559.1| 110093 g9178 i0 79.299 54.1701570680628 314 57 81 4 1 308 35 346 Polychytrium aggregatum 60S ribosomal protein L42 (BJ171DRAFT_500193), mRNA blastn 20693 213 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9299295 9299295 PRJNA278119_P_NODE_24068_length_201_cov_1.940789_g23819_i0 PRJNA278119 24068 201 1.940789 3.90098589 Polychytrium aggregatum 110093 Fungi Fungi 128 2.82e-25   NTclustered gi|2432157378|ref|XM_053107751.1| 110093 g23819 i0 88.073 2.14925373134328 109 11 54 2 82 189 294 187 Polychytrium aggregatum ribosomal protein L6, alpha-beta domain-containing protein (BJ171DRAFT_426015), partial mRNA blastn 432 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11849882 11849882 PRJNA278119_P_NODE_28490_length_185_cov_1.742647_g28241_i0 PRJNA278119 28490 185 1.742647 3.22389695 Fimicolochytrium jonesii 1396493 Fungi Fungi 99 2e-16   NTclustered gi|2432078701|ref|XM_053072586.1| 1396493 g28241 i0 81.452 0.67027027027027 124 19 66 3 30 151 536 415 Fimicolochytrium jonesii ribosomal protein L6, alpha-beta domain-containing protein (EV422DRAFT_567871), partial mRNA blastn 124 99 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
14400285 14400285 PRJNA278119_P_NODE_31292_length_177_cov_1.617188_g31043_i0 PRJNA278119 31292 177 1.617188 2.86242276 Polychytrium aggregatum 110093 Fungi Fungi 86.1 1.47e-12   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g31043 i0 76.301 9.64406779661017 173 33 95 7 7 175 128 296 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 1707 86.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
15674242 15674242 PRJNA278119_P_NODE_5153_length_526_cov_2.572327_g4909_i0 PRJNA278119 5153 526 2.572327 13.53044002 Polychytrium aggregatum 110093 Fungi Fungi 174 1.06e-38   NTclustered gi|2432142218|ref|XM_053114797.1| 110093 g4909 i0 80 39.6673003802281 245 42 46 5 228 470 262 501 Polychytrium aggregatum ribosomal protein S13/S18-domain-containing protein (BJ171DRAFT_597985), partial mRNA blastn 20865 174 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
15674247 15674247 PRJNA278119_P_NODE_5333_length_516_cov_1.995717_g5088_i0 PRJNA278119 5333 516 1.995717 10.29789972 Polychytrium aggregatum 110093 Fungi Fungi 195 7.94e-45   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g5088 i0 76.238 26.9825581395349 404 74 77 16 46 441 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19497495 19497495 PRJNA278119_P_NODE_6536_length_466_cov_3.093525_g6290_i0 PRJNA278119 6536 466 3.093525 14.4158265 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 7.3099999999999995e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g6290 i0 82.313 4.18454935622318 147 26 32 0 20 166 83 229 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;