contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA278119" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2334173 | 2334173 | PRJNA278119_P_NODE_7222_length_443_cov_1.319797_g6975_i0 | PRJNA278119 | 7222 | 443 | 1.319797 | 5.84670071 | Bacteria | 2 | Bacteria | Bacteria | 544 | 5.8e-150 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g6975 | i0 | 89.318 | 115.939051918736 | 440 | 37 | 98 | 10 | 6 | 440 | 2583492 | 2583926 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 51361 | 544 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 2921960 | 2921960 | PRJNA278119_P_NODE_30443_length_179_cov_2.761538_g30194_i0 | PRJNA278119 | 30443 | 179 | 2.761538 | 4.94315302 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 243 | 8.379999999999999e-60 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g30194 | i0 | 92.899 | 182.262569832402 | 169 | 9 | 93 | 3 | 1 | 167 | 2059353 | 2059520 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 32625 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 2922258 | 2922258 | PRJNA278119_P_NODE_8063_length_418_cov_1.268293_g7816_i0 | PRJNA278119 | 8063 | 418 | 1.268293 | 5.30146474 | Waddlia malaysiensis | 219016 | Bacteria | Bacteria | 431 | 4.419999999999998e-116 | NTclustered | gi|27903501|gb|AY184804.1| | 219016 | g7816 | i0 | 85.681 | 202.167464114833 | 426 | 42 | 100 | 17 | 1 | 418 | 1772 | 2186 | Waddlia sp. G817 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 84506 | 431 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia malaysiensis | |
| 3609450 | 3609450 | PRJNA278119_P_NODE_4763_length_551_cov_1.364542_g4519_i0 | PRJNA278119 | 4763 | 551 | 1.364542 | 7.51862642 | Bacteria | 2 | Bacteria | Bacteria | 462 | 2.1099999999999999e-125 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g4519 | i0 | 82.033 | 386.444646098004 | 551 | 91 | 99 | 8 | 5 | 551 | 2001738 | 2002284 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 212931 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 4198120 | 4198120 | PRJNA278119_P_NODE_11324_length_343_cov_2.693878_g11076_i0 | PRJNA278119 | 11324 | 343 | 2.693878 | 9.24000154 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 617 | 2.55e-172 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g11076 | i0 | 99.125 | 101.661807580175 | 343 | 3 | 100 | 0 | 1 | 343 | 1249089 | 1249431 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 34870 | 617 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 4198722 | 4198722 | PRJNA278119_P_NODE_9564_length_379_cov_2.351515_g9317_i0 | PRJNA278119 | 9564 | 379 | 2.351515 | 8.91224185 | Stieleria magnilauensis | 2527963 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|1712780605|gb|CP036432.1| | 2527963 | g9317 | i0 | 100 | 0.0765171503957784 | 29 | 0 | 8 | 0 | 227 | 255 | 3127751 | 3127779 | Planctomycetes bacterium TBK1r chromosome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Stieleria | Stieleria magnilauensis | |
| 5474931 | 5474931 | PRJNA278119_P_NODE_5825_length_494_cov_1.948315_g5579_i0 | PRJNA278119 | 5825 | 494 | 1.948315 | 9.6246761 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 503 | 1.11e-137 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g5579 | i0 | 85.193 | 161.714574898785 | 493 | 69 | 99 | 4 | 2 | 493 | 2583948 | 2584437 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 79887 | 503 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 5474978 | 5474978 | PRJNA278119_P_NODE_8705_length_400_cov_2.165242_g8458_i0 | PRJNA278119 | 8705 | 400 | 2.165242 | 8.660968 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 422 | 2.54e-113 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g8458 | i0 | 88.539 | 256.775 | 349 | 38 | 87 | 2 | 53 | 400 | 2192397 | 2192050 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 102710 | 422 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 10575242 | 10575242 | PRJNA278119_P_NODE_28849_length_184_cov_1.540741_g28600_i0 | PRJNA278119 | 28849 | 184 | 1.540741 | 2.83496344 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 233 | 5.22e-57 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g28600 | i0 | 91.279 | 268.260869565217 | 172 | 13 | 99 | 2 | 14 | 184 | 653752 | 653582 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 49360 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 11849832 | 11849832 | PRJNA278119_P_NODE_2510_length_774_cov_1.750345_g2290_i0 | PRJNA278119 | 2510 | 774 | 1.750345 | 13.5476703 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 1208 | 0 | NTclustered | gi|389546986|gb|JQ401914.1| | 100233 | g2290 | i0 | 95.503 | 99.5813953488372 | 756 | 34 | 98 | 0 | 1 | 756 | 4 | 759 | Uncultured Planctomycetaceae bacterium clone CNY_02145 16S ribosomal RNA gene, partial sequence | blastn | 77076 | 1208 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 11850171 | 11850171 | PRJNA278119_P_NODE_5890_length_491_cov_3.665158_g5644_i0 | PRJNA278119 | 5890 | 491 | 3.665158 | 17.99592578 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 902 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g5644 | i0 | 99.796 | 115.399185336049 | 491 | 1 | 100 | 0 | 1 | 491 | 1251589 | 1251099 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 56661 | 902 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 14400169 | 14400169 | PRJNA278119_P_NODE_22832_length_207_cov_1.031646_g22583_i0 | PRJNA278119 | 22832 | 207 | 1.031646 | 2.13550722 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 230 | 7.7999999999999985e-56 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g22583 | i0 | 89.247 | 92.9420289855072 | 186 | 16 | 90 | 2 | 5 | 190 | 3832565 | 3832384 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 19239 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14400251 | 14400251 | PRJNA278119_P_NODE_28872_length_184_cov_1.540741_g28623_i0 | PRJNA278119 | 28872 | 184 | 1.540741 | 2.83496344 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 244 | 2.41e-60 | NTclustered | gi|2874254040|emb|OY970364.1| | 412056 | g28623 | i0 | 91.16 | 105.66847826087 | 181 | 14 | 98 | 2 | 1 | 180 | 989080 | 989259 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04463.bin.c.15 genome assembly, chromosome: 1 | blastn | 19443 | 244 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14400568 | 14400568 | PRJNA278119_P_NODE_7852_length_424_cov_1.818667_g7605_i0 | PRJNA278119 | 7852 | 424 | 1.818667 | 7.71114808 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 383 | 1.2799999999999998e-101 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g7605 | i0 | 83.295 | 418.129716981132 | 431 | 57 | 100 | 12 | 1 | 424 | 2002912 | 2002490 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 177287 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 15086474 | 15086474 | PRJNA278119_P_NODE_39492_length_166_cov_1.333333_g39243_i0 | PRJNA278119 | 39492 | 166 | 1.333333 | 2.21333278 | Planctomycetia | 203683 | Bacteria | Bacteria | 274 | 2.73e-69 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g39243 | i0 | 96.386 | 113.807228915663 | 166 | 6 | 100 | 0 | 1 | 166 | 1038085 | 1038250 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 18892 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 16948788 | 16948788 | PRJNA278119_P_NODE_3754_length_623_cov_1.768293_g3516_i0 | PRJNA278119 | 3754 | 623 | 1.768293 | 11.01646539 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 1016 | 0 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g3516 | i0 | 96.429 | 106.157303370787 | 616 | 22 | 99 | 0 | 6 | 621 | 2497075 | 2497690 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 66136 | 1016 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 18223109 | 18223109 | PRJNA278119_P_NODE_39395_length_166_cov_1.333333_g39146_i0 | PRJNA278119 | 39395 | 166 | 1.333333 | 2.21333278 | Actomonas aquatica | 2866162 | Bacteria | Bacteria | 75 | 2.97e-9 | NTclustered | gi|2647674565|gb|CP139781.1| | 2866162 | g39146 | i0 | 97.674 | 0.259036144578313 | 43 | 1 | 26 | 0 | 10 | 52 | 1672679 | 1672637 | Actomonas aquatica strain WL0086 chromosome, complete genome | blastn | 43 | 75 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Actomonas | Actomonas aquatica | |
| 19497255 | 19497255 | PRJNA278119_P_NODE_31296_length_177_cov_1.617188_g31047_i0 | PRJNA278119 | 31296 | 177 | 1.617188 | 2.86242276 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 248 | 1.7799999999999998e-61 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g31047 | i0 | 92.09 | 15 | 177 | 12 | 100 | 2 | 1 | 177 | 1830328 | 1830502 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 2655 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 20185002 | 20185002 | PRJNA278119_P_NODE_7876_length_423_cov_2.639037_g7629_i0 | PRJNA278119 | 7876 | 423 | 2.639037 | 11.16312651 | Gemmataceae | 1914233 | Bacteria | Bacteria | 460 | 5.71e-125 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g7629 | i0 | 86.62 | 229.919621749409 | 426 | 46 | 99 | 10 | 1 | 421 | 1303 | 1722 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 97256 | 462 | 0.995670995670996 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 20772953 | 20772953 | PRJNA278119_P_NODE_45637_length_163_cov_0.912281_g45388_i0 | PRJNA278119 | 45637 | 163 | 0.912281 | 1.48701803 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 176 | 7.73e-40 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g45388 | i0 | 86.709 | 4.82822085889571 | 158 | 21 | 97 | 0 | 1 | 158 | 3216485 | 3216328 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 787 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 21460463 | 21460463 | PRJNA278119_P_NODE_1517_length_993_cov_4.096398_g1334_i0 | PRJNA278119 | 1517 | 993 | 4.096398 | 40.67723214 | Nibricoccus | 2576890 | Bacteria | Bacteria | 1171 | 0 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g1334 | i0 | 91.924 | 200.229607250755 | 842 | 61 | 84 | 7 | 1 | 838 | 1902491 | 1901653 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 198828 | 1182 | 0.990693739424704 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 22047651 | 22047651 | PRJNA278119_P_NODE_21338_length_215_cov_1.391566_g21089_i0 | PRJNA278119 | 21338 | 215 | 1.391566 | 2.9918669 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 93.5 | 1.12e-14 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g21089 | i0 | 93.651 | 0.423255813953488 | 63 | 3 | 29 | 1 | 81 | 143 | 4278816 | 4278755 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 91 | 93.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 24597288 | 24597288 | PRJNA278119_P_NODE_22900_length_207_cov_0.924051_g22651_i0 | PRJNA278119 | 22900 | 207 | 0.924051 | 1.91278557 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 230 | 7.7999999999999985e-56 | NTclustered | gi|2874253964|emb|OY970289.1| | 2715253 | g22651 | i0 | 87.192 | 148.217391304348 | 203 | 24 | 97 | 2 | 7 | 207 | 313175 | 312973 | MAG: Pirellulales bacterium isolate MFD05442.bin.c.2 genome assembly, chromosome: 1 | blastn | 30681 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;