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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA278119" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 19 ✖

bioproject 1

  • PRJNA278119 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371520 371520 PRJNA278119_P_NODE_5281_length_519_cov_1.687234_g5037_i0 PRJNA278119 5281 519 1.687234 8.75674446 Dictyostelium purpureum 5786 Evosea other_Eukaryota 272 3.59e-68   NTclustered gi|330818907|ref|XM_003291484.1| 5786 g5037 i0 80.267 40.1059730250482 375 62 71 11 118 485 377 8 Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA blastn 20815 272 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
4198616 4198616 PRJNA278119_P_NODE_46124_length_162_cov_1.840708_g45875_i0 PRJNA278119 46124 162 1.840708 2.98194696 Dictydiaethalium plumbeum 1334544 Evosea other_Eukaryota 84.2 4.78e-12   NTclustered gi|501417078|gb|JX481292.1| 1334544 g45875 i0 88 25.9753086419753 75 4 45 5 81 153 2153 2224 Dictydiaethalium plumbeum voucher MM 30150 18S ribosomal RNA gene, partial sequence blastn 4208 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Dictydiaethaliaceae Dictydiaethalium Dictydiaethalium plumbeum
6161710 6161710 PRJNA278119_P_NODE_4125_length_593_cov_3.060662_g3885_i0 PRJNA278119 4125 593 3.060662 18.14972566 Vannella 95228 Root_unresolved Root_unresolved 878 0   NTclustered gi|507138087|gb|KC583131.1| 590481 g3885 i0 97.835 69.4586846543002 508 11 94 0 86 593 599 92 Uncultured Amoebozoa clone RS.01f.10m.23 18S ribosomal RNA gene, partial sequence blastn 41189 878 1 Eukaryota Amoebozoa             uncultured Amoebozoa
6749086 6749086 PRJNA278119_P_NODE_37006_length_168_cov_0.873950_g36757_i0 PRJNA278119 37006 168 0.87395 1.468236 Entamoeba invadens 33085 Evosea other_Eukaryota 56.5 0.001   NTclustered gi|28274794|gb|AY190083.1| 33085 g36757 i0 100 0.178571428571429 30 0 18 0 40 69 12487 12516 Entamoeba invadens rDNA-containing episome sequence blastn 30 56.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
6749270 6749270 PRJNA278119_P_NODE_7746_length_427_cov_3.846561_g7499_i0 PRJNA278119 7746 427 3.846561 16.42481547 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 217 1.38e-51   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g7499 i0 80.208 57.3395784543326 288 57 67 0 2 289 408 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 24484 217 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8024824 8024824 PRJNA278119_P_NODE_48267_length_152_cov_2.388350_g48018_i0 PRJNA278119 48267 152 2.38835 3.630292 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 132 1.5500000000000002e-26   NTclustered gi|470437344|ref|XM_004338929.1| 1257118 g48018 i0 83.221 4.79605263157895 149 19 96 6 1 146 202 347 Acanthamoeba castellanii str. Neff chaperonin GroL, putative (ACA1_128510), partial mRNA blastn 729 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8711447 8711447 PRJNA278119_P_NODE_25987_length_194_cov_1.068966_g25738_i0 PRJNA278119 25987 194 1.068966 2.07379404 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 359 8.809999999999999e-95   NTclustered gi|2675812010|gb|PP339676.1| 5778 g25738 i0 100 100 194 0 100 0 1 194 332 139 Vermamoeba vermiformis isolate TFEW12 small subunit ribosomal RNA gene, partial sequence blastn 19400 359 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9299562 9299562 PRJNA278119_P_NODE_44428_length_163_cov_1.780702_g44179_i0 PRJNA278119 44428 163 1.780702 2.90254426 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 63.9 6.28e-6   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g44179 i0 97.297 0.398773006134969 37 1 23 0 2 38 488 452 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 65 63.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9986962 9986962 PRJNA278119_P_NODE_37568_length_167_cov_1.762712_g37319_i0 PRJNA278119 37568 167 1.762712 2.94372904 root 1 Root_unresolved Root_unresolved 309 7.53e-80   NTclustered gi|167377751|ref|XM_001734473.1| 370354 g37319 i0 100 21.5449101796407 167 0 100 0 1 167 328 162 Entamoeba dispar SAW760 uncharacterized protein (EDI_314460), partial mRNA blastn 3598 309 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
10575022 10575022 PRJNA278119_P_NODE_12749_length_316_cov_3.434457_g12501_i0 PRJNA278119 12749 316 3.434457 10.85288412 Acytostelium subglobosum 361139 Evosea other_Eukaryota 231 3.5399999999999997e-56   NTclustered gi|831783421|ref|XM_012901593.1| 1410327 g12501 i0 89.189 59.9778481012658 185 20 59 0 132 316 265 449 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 18953 231 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10575457 10575457 PRJNA278119_P_NODE_46209_length_162_cov_1.592920_g45960_i0 PRJNA278119 46209 162 1.59292 2.5805304 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 289 9.44e-74   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g45960 i0 98.765 7.90740740740741 162 2 100 0 1 162 142 303 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 1281 289 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
10575470 10575470 PRJNA278119_P_NODE_47649_length_162_cov_0.893805_g47400_i0 PRJNA278119 47649 162 0.893805 1.4479641 Acytostelium subglobosum 361139 Evosea other_Eukaryota 87.9 3.7e-13   NTclustered gi|831757464|ref|XM_012893584.1| 1410327 g47400 i0 78.358 2.44444444444444 134 29 83 0 1 134 485 352 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 396 87.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
13124945 13124945 PRJNA278119_P_NODE_19011_length_232_cov_0.868852_g18762_i0 PRJNA278119 19011 232 0.868852 2.01573664 Dictyostelium discoideum 44689 Evosea other_Eukaryota 302 1.87e-77   NTclustered gi|66804710|ref|XM_630996.1| 352472 g18762 i0 90.393 95.926724137931 229 22 99 0 1 229 683 911 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 22255 302 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18222945 18222945 PRJNA278119_P_NODE_27535_length_188_cov_2.028777_g27286_i0 PRJNA278119 27535 188 2.028777 3.81410076 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 331 1.85e-86   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g27286 i0 98.404 96.0053191489362 188 3 100 0 1 188 565 378 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 18049 331 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
20772887 20772887 PRJNA278119_P_NODE_40117_length_166_cov_0.888889_g39868_i0 PRJNA278119 40117 166 0.888889 1.47555574 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 241 2.76e-59   NTclustered gi|300078498|gb|GU001160.1| 5755 g39868 i0 92.857 1.01204819277108 168 8 99 3 3 166 5758 5925 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 168 241 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24597142 24597142 PRJNA278119_P_NODE_12300_length_325_cov_1.380435_g12052_i0 PRJNA278119 12300 325 1.380435 4.48641375 Dictyostelium discoideum 44689 Evosea other_Eukaryota 429 1.2099999999999999e-115   NTclustered gi|66804710|ref|XM_630996.1| 352472 g12052 i0 90.462 98.0430769230769 325 31 100 0 1 325 990 666 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 31864 429 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24597317 24597317 PRJNA278119_P_NODE_24400_length_200_cov_1.185430_g24151_i0 PRJNA278119 24400 200 1.18543 2.37086 Dictyostelium purpureum 5786 Evosea other_Eukaryota 145 2.79e-30   NTclustered gi|330822624|ref|XM_003291701.1| 5786 g24151 i0 85.926 13.375 135 19 68 0 4 138 518 652 Dictyostelium purpureum vacuolar H+ ATPase B subunit (DICPUDRAFT_50012), mRNA blastn 2675 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
24597432 24597432 PRJNA278119_P_NODE_3160_length_682_cov_2.034755_g2927_i0 PRJNA278119 3160 682 2.034755 13.8770291 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.28e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g2927 i0 79.235 67.7683284457478 549 104 80 8 6 549 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46218 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25284842 25284842 PRJNA278119_P_NODE_19680_length_226_cov_1.175141_g19431_i0 PRJNA278119 19680 226 1.175141 2.65581866 Dictyostelium 5782 Evosea other_Eukaryota 161 3.2e-35   NTclustered gi|7274|emb|X55973.1| 44689 g19431 i0 79.556 76.5752212389381 225 46 99 0 2 226 1361 1137 D. discoideum EF1-I gene for elongation factor 1 alpha blastn 17306 161 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;