RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA274362 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9298570 9298570 PRJNA274362_S_NODE_21368_length_201_cov_0.986842_g21248_i0 PRJNA274362 21368 201 0.986842 1.98355242 Halichondria panicea 6063 Porifera other_Eukaryota 91.6 3.7e-14   NTclustered gi|1830622841|gb|MN339468.1| 6063 g21248 i0 85.556 0.895522388059702 90 9 44 4 6 93 212 125 Halichondria panicea ferritin heavy chain (FTH1) mRNA, complete cds blastn 180 91.6 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
11849326 11849326 PRJNA274362_S_NODE_30390_length_173_cov_0.838710_g30270_i0 PRJNA274362 30390 173 0.83871 1.4509683 Dysidea avara 196820 Porifera other_Eukaryota 152 1.3899999999999998e-32   NTclustered gi|2749550226|ref|XM_066042492.1| 196820 g30270 i0 84.049 69.4566473988439 163 20 92 6 14 173 88 247 PREDICTED: Dysidea avara actin, cytoplasmic (LOC136250303), mRNA blastn 12016 152 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;