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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370535 370535 PRJNA274362_S_NODE_22641_length_196_cov_1.061224_g22521_i0 PRJNA274362 22641 196 1.061224 2.07999904 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 335 1.5e-87   NTclustered gi|4321711|gb|AF058284.1|AF058284 5764 g22521 i0 97.449 8.39285714285714 196 5 100 0 1 196 652 457 Naegleria andersoni elongation factor 1 alpha (tef2) gene, partial cds blastn 1645 335 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
1645640 1645640 PRJNA274362_S_NODE_37762_length_162_cov_0.884956_g37642_i0 PRJNA274362 37762 162 0.884956 1.43362872 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 104 3.67e-18   NTclustered gi|2031929004|emb|OD956269.1| 5763 g37642 i0 81.061 3.1358024691358 132 24 81 1 29 159 2230 2361 Naegleria fowleri Karachi_NF001 strain blastn 508 104 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
5473936 5473936 PRJNA274362_S_NODE_23885_length_192_cov_0.979021_g23765_i0 PRJNA274362 23885 192 0.979021 1.8797203199999999 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 255 1.17e-63   NTclustered gi|2124395195|ref|XM_044713455.1| 5763 g23765 i0 90.625 3 192 18 100 0 1 192 201 392 Naegleria fowleri uncharacterized protein (FDP41_009491), partial mRNA blastn 576 255 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
8024131 8024131 PRJNA274362_S_NODE_34207_length_166_cov_0.888889_g34087_i0 PRJNA274362 34207 166 0.888889 1.47555574 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 172 1.02e-38   NTclustered gi|2119427415|ref|XM_044701330.1| 5763 g34087 i0 85.802 14.433734939759 162 23 98 0 3 164 763 924 Naegleria fowleri uncharacterized protein (FDP41_010973), partial mRNA blastn 2396 172 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
9298801 9298801 PRJNA274362_S_NODE_32568_length_168_cov_1.294118_g32448_i0 PRJNA274362 32568 168 1.294118 2.17411824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 305 9.81e-79   NTclustered gi|290985314|ref|XM_002675325.1| 5762 g32448 i0 99.405 4.97023809523809 168 1 100 0 1 168 627 460 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80333), mRNA blastn 835 305 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11849277 11849277 PRJNA274362_S_NODE_27910_length_179_cov_1.592308_g27790_i0 PRJNA274362 27910 179 1.592308 2.85023132 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 80.5 6.96e-11   NTclustered gi|2124403634|ref|XM_044686086.1| 51637 g27790 i0 80.18 0.620111731843575 111 19 60 2 2 109 144 34 Naegleria lovaniensis uncharacterized protein (C9374_010531), partial mRNA blastn 111 80.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
11849300 11849300 PRJNA274362_S_NODE_29130_length_176_cov_1.188976_g29010_i0 PRJNA274362 29130 176 1.188976 2.09259776 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 145 2.38e-30   NTclustered gi|2031925621|emb|OD955906.1| 5763 g29010 i0 82.738 59.0227272727273 168 23 94 6 12 176 6933 6769 Naegleria fowleri Karachi_NF001 strain blastn 10388 145 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
12537123 12537123 PRJNA274362_S_NODE_26790_length_183_cov_0.835821_g26670_i0 PRJNA274362 26790 183 0.835821 1.52955243 Naegleria 5761 Heterolobosea other_Eukaryota 243 8.619999999999999e-60   NTclustered gi|2031952651|emb|OD958771.1| 5763 g26670 i0 91.908 90.9016393442623 173 14 95 0 1 173 5092 5264 Naegleria fowleri Karachi_NF001 strain blastn 16635 243 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
15086239 15086239 PRJNA274362_S_NODE_4672_length_386_cov_1.575668_g4552_i0 PRJNA274362 4672 386 1.575668 6.08207848 Naegleria 5761 Heterolobosea other_Eukaryota 457 6.68e-124   NTclustered gi|290973070|ref|XM_002669227.1| 5762 g4552 i0 88.77 92.6450777202073 374 40 97 2 1 373 1085 713 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82840), mRNA blastn 35761 457 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18909964 18909964 PRJNA274362_S_NODE_13575_length_242_cov_1.077720_g13455_i0 PRJNA274362 13575 242 1.07772 2.6080824 Naegleria 5761 Heterolobosea other_Eukaryota 62.1 3.62e-5   NTclustered gi|2031946985|emb|OD958550.1| 5763 g13455 i0 100 13.1322314049587 33 0 14 0 99 131 4325 4357 Naegleria fowleri Karachi_NF001 strain blastn 3178 62.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;