RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370615 370615 PRJNA274362_S_NODE_26541_length_183_cov_1.798507_g26421_i0 PRJNA274362 26541 183 1.798507 3.29126781 Dictyostelium purpureum 5786 Evosea other_Eukaryota 263 6.61e-66   NTclustered gi|330799499|ref|XM_003287734.1| 5786 g26421 i0 93.714 97.2677595628415 175 11 96 0 3 177 263 89 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72359), partial mRNA blastn 17800 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
370636 370636 PRJNA274362_S_NODE_2741_length_494_cov_3.323596_g2623_i0 PRJNA274362 2741 494 3.323596 16.41856424 Entamoeba suis 359305 Evosea other_Eukaryota 444 6.81e-120   NTclustered gi|731174162|dbj|AB914741.1| 359305 g2623 i0 83.368 98.9392712550607 487 74 98 7 1 484 243 725 Entamoeba suis gene for actin, partial cds, isolate: Sa-69 blastn 48876 444 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba suis
4197583 4197583 PRJNA274362_S_NODE_19384_length_209_cov_0.943750_g19264_i0 PRJNA274362 19384 209 0.94375 1.9724375 Dictyostelium discoideum 44689 Evosea other_Eukaryota 250 6.05e-62   NTclustered gi|66805384|ref|XM_631333.1| 352472 g19264 i0 88.406 96.6172248803828 207 24 99 0 1 207 1119 913 Dictyostelium discoideum AX4 hypothetical protein (act4) mRNA, complete cds blastn 20193 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5473668 5473668 PRJNA274362_S_NODE_11605_length_258_cov_3.674641_g11485_i0 PRJNA274362 11605 258 3.674641 9.48057378 Dictyostelium discoideum 44689 Evosea other_Eukaryota 353 5.749999999999998e-93   NTclustered gi|66804710|ref|XM_630996.1| 352472 g11485 i0 91.732 96.7403100775194 254 21 98 0 3 256 652 905 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 24959 353 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
10574637 10574637 PRJNA274362_S_NODE_27329_length_181_cov_1.181818_g27209_i0 PRJNA274362 27329 181 1.181818 2.13909058 Diacheopsis resinae 3092648 Evosea other_Eukaryota 200 5.19e-47   NTclustered gi|2727873016|gb|OR778661.1| 3092648 g27209 i0 88.024 92.2375690607735 167 18 92 2 1 166 497 662 Diacheopsis sp. OShchepin-2023a voucher LK-zV4186 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 16695 200 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida   Diacheopsis Diacheopsis resinae
11849183 11849183 PRJNA274362_S_NODE_23030_length_194_cov_5.020690_g22910_i0 PRJNA274362 23030 194 5.02069 9.7401386 Diachea mitchellii 2928464 Evosea other_Eukaryota 254 4.28e-63   NTclustered gi|2574169345|gb|OP630987.1| 2928464 g22910 i0 90.256 98.2680412371134 195 17 100 2 1 194 875 682 Diachea mitchellii strain MA-Fungi 96407 alpha-tubulin (aTUB) gene, partial cds blastn 19064 254 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Diachea Diachea mitchellii
15086209 15086209 PRJNA274362_S_NODE_31172_length_171_cov_0.991803_g31052_i0 PRJNA274362 31172 171 0.991803 1.69598313 Didymium 5792 Evosea other_Eukaryota 174 2.93e-39   NTclustered gi|2049856602|gb|MG963730.1| 289976 g31052 i0 88.356 84.8479532163743 146 16 85 1 1 145 504 649 Didymium clavus strain MA-Fungi 51663 alpha-tubulin (a-Tub) gene, partial cds blastn 14509 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium clavus
18222412 18222412 PRJNA274362_S_NODE_31135_length_171_cov_1.122951_g31015_i0 PRJNA274362 31135 171 1.122951 1.92024621 Filamoeba nolandi 136452 Evosea other_Eukaryota 161 2.28e-35   NTclustered gi|146448849|gb|EF513192.1| 136452 g31015 i0 86 81.7426900584795 150 21 88 0 15 164 538 687 Filamoeba nolandi elongation factor 1A (EF1A) gene, partial cds blastn 13978 161 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;