RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA274362 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1645165 1645165 PRJNA274362_S_NODE_13862_length_240_cov_0.963351_g13742_i0 PRJNA274362 13862 240 0.963351 2.3120424 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g13742 i0 100 0.358333333333333 29 0 12 0 202 230 192674 192702 Anemonia sulcata genome assembly, chromosome: 19 blastn 86 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6161362 6161362 PRJNA274362_S_NODE_12865_length_248_cov_1.070352_g12745_i0 PRJNA274362 12865 248 1.070352 2.65447296 Opisthokonta 33154 Cnidaria other_Eukaryota 211 3.5e-50   NTclustered gi|2782899435|ref|XM_067068137.1| 252671 g12745 i0 82.906 179.637096774194 234 40 94 0 1 234 752 519 PREDICTED: Clytia hemisphaerica polyubiquitin-B (LOC136811514), mRNA blastn 44550 211 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;