RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA274362 · 24 ✖

analysis 1

  • blastn · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1058664 1058664 PRJNA274362_S_NODE_33781_length_166_cov_6.538462_g33661_i0 PRJNA274362 33781 166 6.538462 10.85384692 Basidiomycota 5204 Fungi Fungi 303 3.48e-78   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g33661 i0 100 135.825301204819 164 0 99 0 3 166 1306 1469 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 22547 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2921295 2921295 PRJNA274362_S_NODE_27883_length_179_cov_1.723077_g27763_i0 PRJNA274362 27883 179 1.723077 3.08430783 Cystobasidium minutum 29899 Fungi Fungi 167 5.189999999999999e-37   NTclustered gi|2781608430|ref|XM_066964513.1| 1397322 g27763 i0 83.616 0.988826815642458 177 29 99 0 2 178 314 138 Cystobasidium minutum MCA 4210 60S ribosomal protein uL3 (P389DRAFT_160844), partial mRNA blastn 177 167 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
2921305 2921305 PRJNA274362_S_NODE_28223_length_178_cov_1.790698_g28103_i0 PRJNA274362 28223 178 1.790698 3.18744244 Conocybe sp. 1916353 Fungi Fungi 189 1.1e-43   NTclustered gi|2645094625|gb|OR085178.1| 1916353 g28103 i0 87.654 89.9438202247191 162 20 91 0 17 178 848 687 Conocybe sp. voucher BR5020170669468 translation elongation factor 1-alpha (TEF1) gene, partial cds blastn 16010 189 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Bolbitiaceae Conocybe Conocybe sp.
4198031 4198031 PRJNA274362_S_NODE_6864_length_325_cov_8.217391_g6744_i0 PRJNA274362 6864 325 8.217391 26.70652075 Malassezia restricta 76775 Fungi Fungi 595 1.1299999999999995e-165   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6744 i0 99.692 90.2892307692308 325 1 100 0 1 325 3002 3326 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 29344 595 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4886595 4886595 PRJNA274362_S_NODE_7224_length_317_cov_8.858209_g7104_i0 PRJNA274362 7224 317 8.858209 28.08052253 Opisthokonta 33154 Fungi Fungi 586 6.579999999999998e-163   NTclustered gi|915512607|gb|KP825390.1| 76775 g7104 i0 100 99.8706624605678 317 0 100 0 1 317 528 212 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 31659 586 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5473916 5473916 PRJNA274362_S_NODE_23025_length_194_cov_9.882759_g22905_i0 PRJNA274362 23025 194 9.882759 19.17255246 Malassezia restricta 76775 Fungi Fungi 359 8.809999999999999e-95   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g22905 i0 100 91.9278350515464 194 0 100 0 1 194 1724 1531 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 17834 359 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5474048 5474048 PRJNA274362_S_NODE_28465_length_178_cov_0.937984_g28345_i0 PRJNA274362 28465 178 0.937984 1.66961152 Dichomitus squalens 114155 Fungi Fungi 99 1.91e-16   NTclustered gi|597994266|ref|XM_007366766.1| 732165 g28345 i0 83.178 1.15730337078652 107 18 60 0 59 165 306 412 Dichomitus squalens LYAD-421 SS1 40S ribosomal protein S2 (DICSQDRAFT_162021), mRNA blastn 206 99 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Dichomitus Dichomitus squalens
6161378 6161378 PRJNA274362_S_NODE_17665_length_217_cov_0.910714_g17545_i0 PRJNA274362 17665 217 0.910714 1.97624938 Opisthokonta 33154 Fungi Fungi 207 3.87e-49   NTclustered gi|1654333751|gb|MK262779.1| 104669 g17545 i0 83.945 96.073732718894 218 33 100 2 1 217 256 40 Cryptococcus amylolentus strain DSM 27421 translation elongation factor 1 alpha (TEF1) gene, partial cds blastn 20848 209 0.990430622009569 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus amylolentus
6161381 6161381 PRJNA274362_S_NODE_18745_length_211_cov_4.253086_g18625_i0 PRJNA274362 18745 211 4.253086 8.97401146 Malassezia 55193 Fungi Fungi 379 7.489999999999999e-101   NTclustered gi|953821272|gb|KT310070.1| 76773 g18625 i0 99.052 99.7914691943128 211 2 100 0 1 211 840 630 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 21056 379 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
6161451 6161451 PRJNA274362_S_NODE_37285_length_162_cov_1.300885_g37165_i0 PRJNA274362 37285 162 1.300885 2.1074337 Erythrobasidium 5413 Fungi Fungi 281 1.58e-71   NTclustered gi|434867010|gb|KC160630.1| 5414 g37165 i0 98.734 96.3827160493827 158 2 98 0 5 162 555 398 Erythrobasidium hasegawianum strain NDZYP32 26S ribosomal RNA gene, partial sequence blastn 15614 281 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
8711258 8711258 PRJNA274362_S_NODE_24207_length_191_cov_0.971831_g24087_i0 PRJNA274362 24207 191 0.971831 1.85619721 Cystofilobasidium 5410 Fungi Fungi 303 4.11e-78   NTclustered gi|1393564781|ref|NG_059009.1| 5411 g24087 i0 95.288 100.010471204188 191 9 100 0 1 191 56 246 Cystofilobasidium bisporidii CBS 6346 28S rRNA gene, partial sequence; from TYPE material blastn 19102 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Cystofilobasidiaceae Cystofilobasidium Cystofilobasidium bisporidii
8711268 8711268 PRJNA274362_S_NODE_26527_length_183_cov_1.880597_g26407_i0 PRJNA274362 26527 183 1.880597 3.44149251 Erythrobasidium 5413 Fungi Fungi 333 4.97e-87   NTclustered gi|406205|dbj|D12803.1|ERHSSRD3 5414 g26407 i0 99.454 100 183 1 100 0 1 183 1565 1383 Erythrobasidium hasegawianum gene for small subunit ribosomal RNA blastn 18300 333 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
9298380 9298380 PRJNA274362_S_NODE_12628_length_249_cov_7.930000_g12508_i0 PRJNA274362 12628 249 7.93 19.7457 Malassezia restricta 76775 Fungi Fungi 444 3.18e-120   NTclustered gi|2301912289|gb|OP432743.1| 76775 g12508 i0 99.588 99.6104417670683 243 1 98 0 1 243 243 1 Malassezia restricta voucher Morchella sextelata ascocarp sample AT20 large subunit ribosomal RNA gene, partial sequence blastn 24803 444 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9986726 9986726 PRJNA274362_S_NODE_31588_length_169_cov_6.533333_g31468_i0 PRJNA274362 31588 169 6.533333 11.04133277 Malassezia 55193 Fungi Fungi 287 3.55e-73   NTclustered gi|56474918|gb|AY743630.1| 76773 g31468 i0 100 91.7159763313609 155 0 92 0 15 169 417 263 Malassezia globosa strain CBS 7966 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15500 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
10574841 10574841 PRJNA274362_S_NODE_37329_length_162_cov_1.221239_g37209_i0 PRJNA274362 37329 162 1.221239 1.97840718 Conocybe pseudocrispa 1276696 Fungi Fungi 193 7.61e-45   NTclustered gi|443496708|gb|JX968442.1| 1276696 g37209 i0 88.199 98.5308641975309 161 19 99 0 1 161 575 415 Conocybe pseudocrispa strain WU18009 translation elongation factor 1-alpha (tef1) gene, partial cds blastn 15962 193 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Bolbitiaceae Conocybe Conocybe pseudocrispa
13124468 13124468 PRJNA274362_S_NODE_27151_length_181_cov_2.356061_g27031_i0 PRJNA274362 27151 181 2.356061 4.26447041 Guyanagaster necrorhizus 856835 Fungi Fungi 106 1.16e-18   NTclustered gi|2085316624|ref|XM_043178938.1| 1450536 g27031 i0 86.869 41.9723756906077 99 8 54 4 85 181 495 400 Guyanagaster necrorhizus MCA 3950 60S ribosomal protein L3 (BT62DRAFT_1073481), partial mRNA blastn 7597 106 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Guyanagaster Guyanagaster necrorhizus
13811980 13811980 PRJNA274362_S_NODE_23311_length_193_cov_3.180556_g23191_i0 PRJNA274362 23311 193 3.180556 6.13847308 Fungi 4751 Fungi Fungi 213 7.21e-51   NTclustered gi|2049830751|gb|MZ355051.1| 5315 g23191 i0 100 101.036269430052 115 0 99 0 77 191 1182 1068 Ganoderma lucidum voucher Cui 14404 large subunit ribosomal RNA gene, partial sequence blastn 19500 213 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
14399631 14399631 PRJNA274362_S_NODE_27792_length_180_cov_0.755725_g27672_i0 PRJNA274362 27792 180 0.755725 1.360305 Cryptococcus sp. 11-1122 1227379 Fungi Fungi 305 1.06e-78   NTclustered gi|402536606|gb|JX515992.1| 1227379 g27672 i0 97.238 100.566666666667 181 3 99 1 1 179 233 53 Cryptococcus sp. 11-1122 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence blastn 18102 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus sp. 11-1122
15086250 15086250 PRJNA274362_S_NODE_8492_length_294_cov_6.853061_g8372_i0 PRJNA274362 8492 294 6.853061 20.14799934 Malassezia 55193 Fungi Fungi 520 6.219999999999998e-143   NTclustered gi|1473096414|gb|MH294248.1| 76773 g8372 i0 98.635 99.8401360544218 293 4 99 0 1 293 293 1 Malassezia globosa isolate GDMUZJ2015344 large subunit ribosomal RNA gene, partial sequence blastn 29353 521 0.998080614203455 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
15673247 15673247 PRJNA274362_S_NODE_22973_length_195_cov_1.047945_g22853_i0 PRJNA274362 22973 195 1.047945 2.04349275 Cutaneotrichosporon oleaginosum 879819 Fungi Fungi 198 2.05e-46   NTclustered gi|2741451493|ref|XM_018424609.2| 879819 g22853 i0 85.128 133.317948717949 195 27 99 2 2 195 460 653 Cutaneotrichosporon oleaginosum uncharacterized protein (COLE_07228), partial mRNA blastn 25997 198 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Cutaneotrichosporon Cutaneotrichosporon oleaginosum
16947746 16947746 PRJNA274362_S_NODE_14174_length_237_cov_3.287234_g14054_i0 PRJNA274362 14174 237 3.287234 7.79074458 Malassezia restricta 76775 Fungi Fungi 438 1.4e-118   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g14054 i0 100 100.485232067511 237 0 100 0 1 237 1694 1930 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 23815 438 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
16947847 16947847 PRJNA274362_S_NODE_19354_length_209_cov_0.975000_g19234_i0 PRJNA274362 19354 209 0.975 2.03775 Apiotrichum porosum 105984 Fungi Fungi 134 6.36e-27   NTclustered gi|1607481603|ref|XM_028616159.1| 105984 g19234 i0 79.474 0.909090909090909 190 37 90 2 11 199 624 436 Apiotrichum porosum 60S ribosomal protein L7 (RPL7), partial mRNA blastn 190 134 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Apiotrichum Apiotrichum porosum
22047314 22047314 PRJNA274362_S_NODE_35758_length_164_cov_1.017391_g35638_i0 PRJNA274362 35758 164 1.017391 1.66852124 Malassezia japonica 223818 Fungi Fungi 124 2.86e-24   NTclustered gi|2594587780|ref|XM_060264863.1| 223818 g35638 i0 86.087 3.39634146341463 115 16 70 0 49 163 249 135 Malassezia japonica 40S ribosomal protein S3 (RPS3), partial mRNA blastn 557 124 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia japonica
24010495 24010495 PRJNA274362_S_NODE_25519_length_186_cov_2.781022_g25399_i0 PRJNA274362 25519 186 2.781022 5.17270092 Malassezia 55193 Fungi Fungi 327 2.36e-85   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g25399 i0 98.387 106.881720430108 186 3 100 0 1 186 2435 2620 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 19880 327 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;