RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 5 ✖

bioproject 1

  • PRJNA274362 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9298324 9298324 PRJNA274362_S_NODE_10028_length_274_cov_3251.888889_g9908_i0 PRJNA274362 10028 274 3251.888889 8910.17555586 Andhravirus andhra 2732591 Viruses Viruses 100 8.86e-17   NTclustered gi|1842001608|ref|NC_047813.1| 1958907 g9908 i0 100 25.6605839416058 54 0 20 0 217 270 18493 18546 Staphylococcus phage Andhra, complete genome blastn 7031 100 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Rountreeviridae Andhravirus Andhravirus andhra
15086227 15086227 PRJNA274362_S_NODE_37592_length_162_cov_0.920354_g37472_i0 PRJNA274362 37592 162 0.920354 1.49097348 root 1 Root_unresolved Root_unresolved 272 9.51e-69   NTclustered gi|2914842066|gb|OR222894.1| 2832643 g37472 i0 96.914 32.2962962962963 162 5 100 0 1 162 15143 15304 MAG: Caudoviricetes sp. isolate MSP0452 genomic sequence blastn 5232 272 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16948027 16948027 PRJNA274362_S_NODE_27434_length_181_cov_0.886364_g27314_i0 PRJNA274362 27434 181 0.886364 1.60431884 Caudoviricetes sp. 2832643 Viruses Viruses 58.4 3.3e-4   NTclustered gi|2059768599|tpg|BK039092.1| 2832643 g27314 i0 90.909 18.3867403314917 44 2 24 2 139 181 48648 48690 MAG TPA_asm: Caudoviricetes sp. isolate ctnV51, partial genome blastn 3328 58.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20771920 20771920 PRJNA274362_S_NODE_19157_length_210_cov_0.956522_g19037_i0 PRJNA274362 19157 210 0.956522 2.0086962 Caudoviricetes sp. 2832643 Viruses Viruses 388 1.24e-103   NTclustered gi|2915034053|gb|OR222678.1| 2832643 g19037 i0 100 52.2190476190476 210 0 100 0 1 210 102050 101841 MAG: Caudoviricetes sp. isolate MSP0255 genomic sequence blastn 10966 388 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
25284753 25284753 PRJNA274362_S_NODE_6220_length_339_cov_7.827586_g6100_i0 PRJNA274362 6220 339 7.827586 26.53551654 root 1 Root_unresolved Root_unresolved 621 1.95e-173   NTclustered gi|2915034053|gb|OR222678.1| 2832643 g6100 i0 99.705 71.2772861356932 339 1 100 0 1 339 30536 30198 MAG: Caudoviricetes sp. isolate MSP0255 genomic sequence blastn 24163 621 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;