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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA274362" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA274362 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370615 370615 PRJNA274362_S_NODE_26541_length_183_cov_1.798507_g26421_i0 PRJNA274362 26541 183 1.798507 3.29126781 Dictyostelium purpureum 5786 Evosea other_Eukaryota 263 6.61e-66   NTclustered gi|330799499|ref|XM_003287734.1| 5786 g26421 i0 93.714 97.2677595628415 175 11 96 0 3 177 263 89 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72359), partial mRNA blastn 17800 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
370636 370636 PRJNA274362_S_NODE_2741_length_494_cov_3.323596_g2623_i0 PRJNA274362 2741 494 3.323596 16.41856424 Entamoeba suis 359305 Evosea other_Eukaryota 444 6.81e-120   NTclustered gi|731174162|dbj|AB914741.1| 359305 g2623 i0 83.368 98.9392712550607 487 74 98 7 1 484 243 725 Entamoeba suis gene for actin, partial cds, isolate: Sa-69 blastn 48876 444 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba suis
4197523 4197523 PRJNA274362_S_NODE_16684_length_222_cov_1.202312_g16564_i0 PRJNA274362 16684 222 1.202312 2.66913264 Ripella tribonemae 2047823 Discosea other_Eukaryota 379 7.949999999999998e-101   NTclustered gi|1269228471|gb|MF683596.1| 2047823 g16564 i0 97.738 99.8828828828829 221 3 99 2 1 219 1297 1517 Ripella tribonemae clone 22.1.14 18S ribosomal RNA gene, partial sequence blastn 22174 379 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
4197583 4197583 PRJNA274362_S_NODE_19384_length_209_cov_0.943750_g19264_i0 PRJNA274362 19384 209 0.94375 1.9724375 Dictyostelium discoideum 44689 Evosea other_Eukaryota 250 6.05e-62   NTclustered gi|66805384|ref|XM_631333.1| 352472 g19264 i0 88.406 96.6172248803828 207 24 99 0 1 207 1119 913 Dictyostelium discoideum AX4 hypothetical protein (act4) mRNA, complete cds blastn 20193 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5473668 5473668 PRJNA274362_S_NODE_11605_length_258_cov_3.674641_g11485_i0 PRJNA274362 11605 258 3.674641 9.48057378 Dictyostelium discoideum 44689 Evosea other_Eukaryota 353 5.749999999999998e-93   NTclustered gi|66804710|ref|XM_630996.1| 352472 g11485 i0 91.732 96.7403100775194 254 21 98 0 3 256 652 905 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 24959 353 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5473875 5473875 PRJNA274362_S_NODE_21145_length_201_cov_6.480263_g21025_i0 PRJNA274362 21145 201 6.480263 13.02532863 Platyamoeba placida 3454475 Discosea other_Eukaryota 267 5.73e-67   NTclustered gi|33946348|gb|AY294153.1| 197527 g21025 i0 90.547 95.4129353233831 201 19 100 0 1 201 860 660 Platyamoeba placida actin mRNA, partial cds blastn 19178 267 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
8024165 8024165 PRJNA274362_S_NODE_35867_length_164_cov_0.904348_g35747_i0 PRJNA274362 35867 164 0.904348 1.48313072 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 143 7.9e-30   NTclustered gi|470521480|ref|XM_004353671.1| 1257118 g35747 i0 82.317 27.530487804878 164 29 100 0 1 164 316 153 Acanthamoeba castellanii str. Neff 60S ribosomal protein L27a, putative (ACA1_376690), partial mRNA blastn 4515 143 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10574637 10574637 PRJNA274362_S_NODE_27329_length_181_cov_1.181818_g27209_i0 PRJNA274362 27329 181 1.181818 2.13909058 Diacheopsis resinae 3092648 Evosea other_Eukaryota 200 5.19e-47   NTclustered gi|2727873016|gb|OR778661.1| 3092648 g27209 i0 88.024 92.2375690607735 167 18 92 2 1 166 497 662 Diacheopsis sp. OShchepin-2023a voucher LK-zV4186 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 16695 200 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida   Diacheopsis Diacheopsis resinae
11849183 11849183 PRJNA274362_S_NODE_23030_length_194_cov_5.020690_g22910_i0 PRJNA274362 23030 194 5.02069 9.7401386 Diachea mitchellii 2928464 Evosea other_Eukaryota 254 4.28e-63   NTclustered gi|2574169345|gb|OP630987.1| 2928464 g22910 i0 90.256 98.2680412371134 195 17 100 2 1 194 875 682 Diachea mitchellii strain MA-Fungi 96407 alpha-tubulin (aTUB) gene, partial cds blastn 19064 254 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Diachea Diachea mitchellii
11849205 11849205 PRJNA274362_S_NODE_24210_length_191_cov_0.964789_g24090_i0 PRJNA274362 24210 191 0.964789 1.84274699 Flabellula sp. SBGL1 1215617 Tubulinea other_Eukaryota 191 3.34e-44   NTclustered gi|1475408521|dbj|LC341034.1| 1215617 g24090 i0 86.286 96.2198952879581 175 24 92 0 15 189 482 656 Flabellula sp. SBGL1 gene for actin, partial cds, clone: 4 blastn 18378 191 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Flabellula Flabellula sp. SBGL1
11849233 11849233 PRJNA274362_S_NODE_25510_length_186_cov_3.802920_g25390_i0 PRJNA274362 25510 186 3.80292 7.0734312 Platyamoeba placida 3454475 Discosea other_Eukaryota 252 1.46e-62   NTclustered gi|33946348|gb|AY294153.1| 197527 g25390 i0 91.713 95.0322580645161 181 15 97 0 6 186 333 513 Platyamoeba placida actin mRNA, partial cds blastn 17676 252 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
15086209 15086209 PRJNA274362_S_NODE_31172_length_171_cov_0.991803_g31052_i0 PRJNA274362 31172 171 0.991803 1.69598313 Didymium 5792 Evosea other_Eukaryota 174 2.93e-39   NTclustered gi|2049856602|gb|MG963730.1| 289976 g31052 i0 88.356 84.8479532163743 146 16 85 1 1 145 504 649 Didymium clavus strain MA-Fungi 51663 alpha-tubulin (a-Tub) gene, partial cds blastn 14509 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium clavus
15673662 15673662 PRJNA274362_S_NODE_9453_length_281_cov_4.978448_g9333_i0 PRJNA274362 9453 281 4.978448 13.98943888 Ripella decalvata 2047822 Discosea other_Eukaryota 444 3.66e-120   NTclustered gi|1269228436|gb|MF683561.1| 2047822 g9333 i0 95.374 100.555160142349 281 9 100 4 1 281 394 118 Ripella decalvata clone 26.2.18 18S ribosomal RNA gene, partial sequence blastn 28256 444 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
18222401 18222401 PRJNA274362_S_NODE_30515_length_172_cov_1.650407_g30395_i0 PRJNA274362 30515 172 1.650407 2.83870004 Ripella sp. 805 1217113 Discosea other_Eukaryota 222 1.04e-53   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g30395 i0 100 81.6860465116279 120 0 70 0 53 172 683 564 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 14050 222 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
18222412 18222412 PRJNA274362_S_NODE_31135_length_171_cov_1.122951_g31015_i0 PRJNA274362 31135 171 1.122951 1.92024621 Filamoeba nolandi 136452 Evosea other_Eukaryota 161 2.28e-35   NTclustered gi|146448849|gb|EF513192.1| 136452 g31015 i0 86 81.7426900584795 150 21 88 0 15 164 538 687 Filamoeba nolandi elongation factor 1A (EF1A) gene, partial cds blastn 13978 161 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
20771961 20771961 PRJNA274362_S_NODE_21057_length_202_cov_1.052288_g20937_i0 PRJNA274362 21057 202 1.052288 2.12562176 Amoebozoa sp. SZA28 688090 Root_unresolved Root_unresolved 182 2.15e-41   NTclustered gi|406717743|emb|HE598749.1| 688090 g20937 i0 88.591 75.4009900990099 149 17 74 0 1 149 888 740 Amoebozoa sp. SZA 28 partial actin gene, isolate SZA 28 blastn 15231 182 1 Eukaryota Amoebozoa             Amoebozoa sp. SZA28
24596653 24596653 PRJNA274362_S_NODE_22800_length_195_cov_1.753425_g22680_i0 PRJNA274362 22800 195 1.753425 3.41917875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.005   NTclustered gi|470406023|ref|XM_004335858.1| 1257118 g22680 i0 100 3.45128205128205 29 0 15 0 167 195 1058 1086 Acanthamoeba castellanii str. Neff Poly(ADPribose) polymerase catalytic domain containing protein (ACA1_364190), partial mRNA blastn 673 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;