RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA270367 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9298126 9298126 PRJNA270367_P_NODE_35308_length_183_cov_0.843284_g35103_i0 PRJNA270367 35308 183 0.843284 1.54320972 Linderina pennispora 61395 Fungi Fungi 220 4.04e-53   NTclustered gi|2028315762|ref|XM_040886762.1| 61395 g35103 i0 88.462 126.48087431694 182 21 99 0 2 183 765 584 Linderina pennispora ubiquitin-domain-containing protein (DL89DRAFT_265656), partial mRNA blastn 23146 220 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
14398882 14398882 PRJNA270367_P_NODE_11952_length_381_cov_1.415663_g11750_i0 PRJNA270367 11952 381 1.415663 5.39367603 Kickxella alabastrina 61397 Fungi Fungi 202 3.4099999999999996e-47   NTclustered gi|2324016046|ref|XM_051533324.1| 61397 g11750 i0 79.522 73.1784776902887 293 52 76 6 7 295 564 276 Kickxella alabastrina enolase (BX661DRAFT_163230), partial mRNA blastn 27881 202 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
18221930 18221930 PRJNA270367_P_NODE_6815_length_519_cov_1.400000_g6617_i0 PRJNA270367 6815 519 1.4 7.266 Kickxella alabastrina 61397 Fungi Fungi 141 1.06e-28   NTclustered gi|2324017890|ref|XM_051536612.1| 61397 g6617 i0 78.112 13.0038535645472 233 44 44 5 289 517 1252 1023 Kickxella alabastrina ribosomal protein L3-domain-containing protein (BX661DRAFT_184853), mRNA blastn 6749 141 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
20771503 20771503 PRJNA270367_P_NODE_2837_length_821_cov_9.788860_g2661_i0 PRJNA270367 2837 821 9.78886 80.3665406 Linderina pennispora 61395 Fungi Fungi 350 2.6100000000000004e-91   NTclustered gi|2028325604|ref|XM_040889545.1| 61395 g2661 i0 80.659 54.8721071863581 455 84 55 4 284 736 498 46 Linderina pennispora 40S ribosomal protein S9 (DL89DRAFT_279070), partial mRNA blastn 45050 350 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
24010276 24010276 PRJNA270367_P_NODE_46739_length_162_cov_0.920354_g46534_i0 PRJNA270367 46739 162 0.920354 1.49097348 Capillidium 2878381 Fungi Fungi 110 7.89e-20   NTclustered gi|381356203|gb|JF816228.1| 1167815 g46534 i0 79.375 28.4074074074074 160 29 98 4 5 162 270 113 Conidiobolus denaeosporus strain ATCC 12940 elongation factor-1 alpha (EF1-a) gene, partial cds blastn 4602 110 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Capillidium Capillidium denaeosporum
24596227 24596227 PRJNA270367_P_NODE_34540_length_185_cov_2.147059_g34335_i0 PRJNA270367 34540 185 2.147059 3.97205915 Linderina pennispora 61395 Fungi Fungi 108 3.32e-19   NTclustered gi|2028328774|ref|XM_040890749.1| 61395 g34335 i0 81.89 3.32432432432432 127 23 69 0 3 129 387 261 Linderina pennispora 60S ribosomal protein L1-B (DL89DRAFT_297445), partial mRNA blastn 615 108 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;