RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA270367 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20771556 20771556 PRJNA270367_P_NODE_35157_length_183_cov_1.552239_g34952_i0 PRJNA270367 35157 183 1.552239 2.84059737 Diplorchis hangzhouensis 1131906 Platyhelminthes Platyhelminthes 54.7 0.004   NTclustered gi|379771686|gb|JQ038227.1| 1131906 g34952 i0 100 0.158469945355191 29 0 16 0 4 32 5389 5361 Diplorchis hangzhouensis mitochondrion sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Diplorchis Diplorchis hangzhouensis
22046798 22046798 PRJNA270367_P_NODE_9458_length_434_cov_3.529870_g9257_i0 PRJNA270367 9458 434 3.52987 15.3196358 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 728 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g9257 i0 97.005 1 434 12 100 1 1 434 18 450 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 434 728 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;