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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA270367 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370053 370053 PRJNA270367_P_NODE_31941_length_195_cov_1.767123_g31736_i0 PRJNA270367 31941 195 1.767123 3.44588985 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 176 9.58e-40   NTclustered gi|470486807|ref|XM_004344593.1| 1257118 g31736 i0 83.077 1 195 31 99 2 1 194 475 282 Acanthamoeba castellanii str. Neff MC family transporter: phosphate, putative (ACA1_278610), partial mRNA blastn 195 176 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1645002 1645002 PRJNA270367_P_NODE_45222_length_163_cov_1.070175_g45017_i0 PRJNA270367 45222 163 1.070175 1.74438525 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 117 4.75e-22   NTclustered gi|470376675|ref|XM_004333258.1| 1257118 g45017 i0 86.239 2.85276073619632 109 13 66 2 1 108 6360 6253 Acanthamoeba castellanii str. Neff transcriptional regulatorrelated, putative (ACA1_189590), partial mRNA blastn 465 117 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4885670 4885670 PRJNA270367_P_NODE_17264_length_299_cov_1.916000_g17059_i0 PRJNA270367 17264 299 1.916 5.72884 Ripella 1217112 Discosea other_Eukaryota 505 1.7799999999999995e-138   NTclustered gi|1269228378|gb|MF683503.1| 2047821 g17059 i0 97.01 100.541806020067 301 7 100 2 1 299 1531 1231 Ripella platypodia clone 26.10.41 18S ribosomal RNA gene, partial sequence blastn 30062 505 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
5473423 5473423 PRJNA270367_P_NODE_31585_length_197_cov_1.054054_g31380_i0 PRJNA270367 31585 197 1.054054 2.07648638 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 187 4.4799999999999984e-43   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g31380 i0 83.838 19.3553299492386 198 30 100 2 1 197 2152 2348 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 3813 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8023366 8023366 PRJNA270367_P_NODE_25187_length_229_cov_0.788889_g24982_i0 PRJNA270367 25187 229 0.788889 1.80655581 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 220 5.29e-53   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g24982 i0 84.444 84.6069868995633 225 33 98 2 5 228 1102 1325 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 19375 220 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8710979 8710979 PRJNA270367_P_NODE_41627_length_167_cov_0.881356_g41422_i0 PRJNA270367 41627 167 0.881356 1.47186452 Acanthamoeba 5754 Discosea other_Eukaryota 309 7.53e-80   NTclustered gi|1862917025|emb|LR813621.1| 5755 g41422 i0 100 100.269461077844 167 0 100 0 1 167 349 183 Acanthamoeba castellanii partial 18S rRNA gene, strain Namur blastn 16745 309 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9297879 9297879 PRJNA270367_P_NODE_10948_length_400_cov_1.951567_g10746_i0 PRJNA270367 10948 400 1.951567 7.806268 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 228 5.929999999999999e-55   NTclustered gi|470467440|ref|XM_004341747.1| 1257118 g10746 i0 77.228 25.045 404 83 99 6 1 398 617 217 Acanthamoeba castellanii str. Neff guanine nucleotide-binding protein beta subunit, putative (ACA1_199990), partial mRNA blastn 10018 228 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9297882 9297882 PRJNA270367_P_NODE_11148_length_396_cov_1.668588_g10946_i0 PRJNA270367 11148 396 1.668588 6.60760848 Ripella tribonemae 2047823 Discosea other_Eukaryota 595 1.4e-165   NTclustered gi|1269228474|gb|MF683599.1| 2047823 g10946 i0 94 94.9318181818182 400 12 100 7 1 396 933 542 Ripella tribonemae clone 22.9.5 18S ribosomal RNA gene, partial sequence blastn 37593 595 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
10573870 10573870 PRJNA270367_P_NODE_12009_length_380_cov_1.540785_g11807_i0 PRJNA270367 12009 380 1.540785 5.854983 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 172 2.66e-38   NTclustered gi|470397200|ref|XM_004335158.1| 1257118 g11807 i0 76.204 0.928947368421053 353 68 92 13 31 378 562 903 Acanthamoeba castellanii str. Neff NAD-dependent epimerase/dehydratase family protein (ACA1_100080), partial mRNA blastn 353 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16947359 16947359 PRJNA270367_P_NODE_26014_length_224_cov_1.102857_g25809_i0 PRJNA270367 26014 224 1.102857 2.47039968 Platyamoeba placida 3454475 Discosea other_Eukaryota 257 3.93e-64   NTclustered gi|33946348|gb|AY294153.1| 197527 g25809 i0 87.783 96.6607142857143 221 26 99 1 4 224 636 417 Platyamoeba placida actin mRNA, partial cds blastn 21652 257 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
20771542 20771542 PRJNA270367_P_NODE_33797_length_188_cov_1.359712_g33592_i0 PRJNA270367 33797 188 1.359712 2.55625856 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 172 1.19e-38   NTclustered gi|470391451|ref|XM_004334622.1| 1257118 g33592 i0 86.061 70.5531914893617 165 17 86 4 24 185 447 286 Acanthamoeba castellanii str. Neff ATP:L-methionine S-Adenosyltransferase (ACA1_091670), partial mRNA blastn 13264 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20771600 20771600 PRJNA270367_P_NODE_40937_length_168_cov_0.873950_g40732_i0 PRJNA270367 40937 168 0.87395 1.468236 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 193 7.97e-45   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g40732 i0 87.805 7.13690476190476 164 20 98 0 5 168 151 314 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 1199 193 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21459931 21459931 PRJNA270367_P_NODE_3617_length_723_cov_5.278932_g3435_i0 PRJNA270367 3617 723 5.278932 38.16667836 Vannella 95228 Discosea other_Eukaryota 1208 0   NTclustered gi|861554667|gb|KP719197.1| 197532 g3435 i0 96.68 75.9502074688797 723 23 100 1 1 723 585 1306 Vannella simplex strain A17WVB small subunit ribosomal RNA gene, partial sequence blastn 54912 1208 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
22046647 22046647 PRJNA270367_P_NODE_38098_length_173_cov_1.258065_g37893_i0 PRJNA270367 38098 173 1.258065 2.17645245 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.015   NTclustered gi|470488604|ref|XM_004344766.1| 1257118 g37893 i0 100 0.161849710982659 28 0 16 0 56 83 1627 1600 Acanthamoeba castellanii str. Neff UNC93 family protein (ACA1_282380), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22046678 22046678 PRJNA270367_P_NODE_41638_length_167_cov_0.881356_g41433_i0 PRJNA270367 41638 167 0.881356 1.47186452 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 102 1.37e-17   NTclustered gi|119433807|gb|EF053509.1| 5755 g41433 i0 79.577 1.62275449101796 142 29 85 0 2 143 844 985 Acanthamoeba castellanii cysteine protease mRNA, complete cds blastn 271 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23322253 23322253 PRJNA270367_P_NODE_5979_length_558_cov_2.611002_g5786_i0 PRJNA270367 5979 558 2.611002 14.56939116 Ripella sp. 805 1217113 Discosea other_Eukaryota 865 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5786 i0 95.118 99.2777777777778 553 19 99 8 8 558 1 547 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 55397 865 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
23322259 23322259 PRJNA270367_P_NODE_6279_length_542_cov_1.780933_g6084_i0 PRJNA270367 6279 542 1.780933 9.65265686 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 250 1.7599999999999998e-61   NTclustered gi|470528557|ref|XM_004367868.1| 1257118 g6084 i0 81.41 5.79889298892989 312 52 57 6 234 542 353 45 Acanthamoeba castellanii str. Neff ribosomal protein S8e, putative (ACA1_288920), partial mRNA blastn 3143 250 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24596251 24596251 PRJNA270367_P_NODE_3800_length_705_cov_2.382622_g3616_i0 PRJNA270367 3800 705 2.382622 16.7974851 Platyamoeba placida 3454475 Discosea other_Eukaryota 896 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g3616 i0 92.126 98.3290780141844 635 50 90 0 1 635 548 1182 Platyamoeba placida actin mRNA, partial cds blastn 69322 896 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;