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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA270367 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370276 370276 PRJNA270367_P_NODE_9681_length_428_cov_9.279683_g9479_i0 PRJNA270367 9681 428 9.279683 39.71704324 Polychytrium aggregatum 110093 Fungi Fungi 169 3.93e-37   NTclustered gi|2432142886|ref|XM_053110559.1| 110093 g9479 i0 77.244 47.4906542056075 312 55 70 9 73 373 337 31 Polychytrium aggregatum 60S ribosomal protein L42 (BJ171DRAFT_500193), mRNA blastn 20326 169 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
8023220 8023220 PRJNA270367_P_NODE_10067_length_419_cov_7.208108_g9865_i0 PRJNA270367 10067 419 7.208108 30.20197252 Batrachochytrium dendrobatidis 109871 Fungi Fungi 121 1.09e-22   NTclustered gi|575480991|ref|XM_006679727.1| 684364 g9865 i0 81.046 0.861575178997613 153 27 36 2 50 201 25 176 Batrachochytrium dendrobatidis JAM81 uncharacterized protein (BATDEDRAFT_12294), partial mRNA blastn 361 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
10573921 10573921 PRJNA270367_P_NODE_1669_length_1086_cov_8.503375_g1517_i0 PRJNA270367 1669 1086 8.503375 92.3466525 Fimicolochytrium jonesii 1396493 Fungi Fungi 645 3.979999999999999e-180   NTclustered gi|2432080769|ref|XM_053070516.1| 1396493 g1517 i0 80.44 80.183241252302 864 153 79 13 166 1021 1069 214 Fimicolochytrium jonesii mitochondrial carrier domain-containing protein (EV422DRAFT_532223), mRNA blastn 87079 645 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
10574275 10574275 PRJNA270367_P_NODE_9149_length_442_cov_2.470738_g8950_i0 PRJNA270367 9149 442 2.470738 10.92066196 Polychytrium aggregatum 110093 Fungi Fungi 278 6.48e-70   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g8950 i0 79.455 40.0814479638009 404 73 90 7 35 433 1066 668 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 17716 278 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11848745 11848745 PRJNA270367_P_NODE_37370_length_175_cov_1.650794_g37165_i0 PRJNA270367 37370 175 1.650794 2.8888895 Polychytrium aggregatum 110093 Fungi Fungi 89.8 1.12e-13   NTclustered gi|2432143050|ref|XM_053110573.1| 110093 g37165 i0 84.043 0.537142857142857 94 13 53 2 19 111 639 731 Polychytrium aggregatum ribosomal family S4e (BJ171DRAFT_500618), mRNA blastn 94 89.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16947364 16947364 PRJNA270367_P_NODE_26574_length_221_cov_0.906977_g26369_i0 PRJNA270367 26574 221 0.906977 2.00441917 Polychytrium aggregatum 110093 Fungi Fungi 182 2.39e-41   NTclustered gi|2432131152|ref|XM_053108251.1| 110093 g26369 i0 83.168 10.2579185520362 202 30 90 3 2 201 714 515 Polychytrium aggregatum putative succinyl-CoA synthetase alpha chain, gdp-forming (BJ171DRAFT_454445), mRNA blastn 2267 182 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19496218 19496218 PRJNA270367_P_NODE_8856_length_450_cov_1.002494_g8657_i0 PRJNA270367 8856 450 1.002494 4.511223 Fimicolochytrium jonesii 1396493 Fungi Fungi 261 6.65e-65   NTclustered gi|2432051426|ref|XM_053072055.1| 1396493 g8657 i0 77.384 22.9333333333333 451 94 99 8 4 450 585 139 Fimicolochytrium jonesii ribosomal family S4e-domain-containing protein (EV422DRAFT_563332), partial mRNA blastn 10320 261 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
20771522 20771522 PRJNA270367_P_NODE_31317_length_198_cov_1.275168_g31112_i0 PRJNA270367 31317 198 1.275168 2.52483264 Fimicolochytrium jonesii 1396493 Fungi Fungi 84.2 6.09e-12   NTclustered gi|2432075625|ref|XM_053068329.1| 1396493 g31112 i0 85.366 0.414141414141414 82 10 41 2 5 85 1843 1923 Fimicolochytrium jonesii Fungalysin metallopeptidase-domain-containing protein (EV422DRAFT_50326), mRNA blastn 82 84.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
23321920 23321920 PRJNA270367_P_NODE_18399_length_286_cov_1.586498_g18194_i0 PRJNA270367 18399 286 1.586498 4.53738428 Synchytrium microbalum 1806994 Fungi Fungi 165 3.25e-36   NTclustered gi|1759158146|ref|XM_031170386.1| 1806994 g18194 i0 81.818 3.17832167832168 198 35 69 1 82 278 1225 1422 Synchytrium microbalum uncharacterized protein (SmJEL517_g04458), partial mRNA blastn 909 165 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
23321927 23321927 PRJNA270367_P_NODE_18779_length_282_cov_1.085837_g18574_i0 PRJNA270367 18779 282 1.085837 3.06206034 Polychytrium aggregatum 110093 Fungi Fungi 89.8 1.98e-13   NTclustered gi|2432152228|ref|XM_053111343.1| 110093 g18574 i0 84.615 0.776595744680851 91 12 32 2 44 133 249 160 Polychytrium aggregatum ribosomal protein L30, ferredoxin-like fold domain-containing protein (BJ171DRAFT_509118), mRNA blastn 219 89.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;