RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA270367 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
369912 369912 PRJNA270367_P_NODE_1721_length_1066_cov_2.633235_g1568_i0 PRJNA270367 1721 1066 2.633235 28.0702851 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 658 0   NTclustered gi|119116880|gb|DQ924976.1| 413579 g1568 i0 78.172 91.015947467167 1072 207 99 23 3 1062 1130 74 Unidentified Oxymonadida clone 4 alpha-tubulin (Atub) mRNA, partial cds blastn 97023 658 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
11848522 11848522 PRJNA270367_P_NODE_15850_length_318_cov_1.185874_g15645_i0 PRJNA270367 15850 318 1.185874 3.77107932 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 63.9 1.38e-5   NTclustered gi|2806466521|ref|XM_068506468.1| 1144522 g15645 i0 95.122 0.128930817610063 41 1 13 1 174 214 2164 2203 Tritrichomonas foetus uncharacterized protein (TRFO_28932), partial mRNA blastn 41 63.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
14399048 14399048 PRJNA270367_P_NODE_29072_length_208_cov_0.981132_g28867_i0 PRJNA270367 29072 208 0.981132 2.04075456 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.018   NTclustered gi|2794961975|ref|XM_067867602.1| 2049356 g28867 i0 100 0.134615384615385 28 0 13 0 35 62 6216 6243 Monocercomonoides exilis uncharacterized protein (MONOS_14772), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
15672913 15672913 PRJNA270367_P_NODE_4653_length_634_cov_8.276923_g4464_i0 PRJNA270367 4653 634 8.276923 52.47569182 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 257 1.24e-63   NTclustered gi|2794954461|ref|XM_067876948.1| 2049356 g4464 i0 77.65 50.2334384858044 434 89 68 7 165 595 462 34 Monocercomonoides exilis histone H3 (MONOS_6699), mRNA blastn 31848 257 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
20771486 20771486 PRJNA270367_P_NODE_25797_length_225_cov_1.477273_g25592_i0 PRJNA270367 25797 225 1.477273 3.32386425 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 62.1 3.32e-5   NTclustered gi|2319647530|ref|XM_001581711.2| 412133 g25592 i0 94.872 0.173333333333333 39 2 17 0 175 213 1323 1361 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0323080), partial mRNA blastn 39 62.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
22046633 22046633 PRJNA270367_P_NODE_36858_length_177_cov_1.500000_g36653_i0 PRJNA270367 36858 177 1.5 2.655 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 167 5.12e-37   NTclustered gi|74039647|gb|DQ118092.1| 342808 g36653 i0 91.667 12.0112994350282 120 10 68 0 58 177 409 528 Trimastix pyriformis ribosomal protein L7A mRNA, complete cds blastn 2126 167 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;