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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 17 ✖

bioproject 1

  • PRJNA270367 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
369977 369977 PRJNA270367_P_NODE_23421_length_241_cov_0.807292_g23216_i0 PRJNA270367 23421 241 0.807292 1.94557372 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 156 1.6100000000000002e-33   NTclustered gi|2119429492|ref|XM_044701888.1| 5763 g23216 i0 79.039 14.7759336099585 229 46 95 2 7 234 546 319 Naegleria fowleri uncharacterized protein (FDP41_011476), partial mRNA blastn 3561 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
370025 370025 PRJNA270367_P_NODE_28121_length_213_cov_0.951220_g27916_i0 PRJNA270367 28121 213 0.95122 2.0260986 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 235 1.7299999999999998e-57   NTclustered gi|686630350|ref|XM_009309346.1| 71804 g27916 i0 87.624 23.4741784037559 202 25 95 0 12 213 585 786 Trypanosoma grayi ribosomal protein L13 partial mRNA blastn 5000 235 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
4886278 4886278 PRJNA270367_P_NODE_43864_length_165_cov_0.896552_g43659_i0 PRJNA270367 43864 165 0.896552 1.4793108 Leishmania 5658 Euglenozoa other_Eukaryota 108 2.9e-19   NTclustered gi|9864198|gb|AF291716.1|AF291716 5660 g43659 i0 79.503 2.87878787878788 161 25 95 8 9 165 2340 2184 Leishmania braziliensis heat shock protein 70 (hsp70) gene, complete cds blastn 475 108 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
6747823 6747823 PRJNA270367_P_NODE_39786_length_169_cov_0.866667_g39581_i0 PRJNA270367 39786 169 0.866667 1.46466723 Leishmania mexicana 5665 Euglenozoa other_Eukaryota 154 3.76e-33   NTclustered gi|401422019|ref|XM_003875449.1| 929439 g39581 i0 86.111 9.8698224852071 144 18 85 2 19 161 390 248 Leishmania mexicana MHOM/GT/2001/U1103 putative 40S ribosomal protein S15 partial mRNA blastn 1668 154 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania mexicana
8023625 8023625 PRJNA270367_P_NODE_9467_length_434_cov_2.574026_g9266_i0 PRJNA270367 9467 434 2.574026 11.17127284 Trypanosoma vivax 5699 Euglenozoa other_Eukaryota 58.4 0.001   NTclustered gi|340056612|emb|HE573026.1| 1055687 g9266 i0 100 1.31797235023041 31 0 7 0 65 95 2877724 2877694 Trypanosoma vivax Y486 annotated genomic contig, chromosome 10 blastn 572 58.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
9298166 9298166 PRJNA270367_P_NODE_39668_length_169_cov_0.866667_g39463_i0 PRJNA270367 39668 169 0.866667 1.46466723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 287 3.55e-73   NTclustered gi|290988713|ref|XM_002676993.1| 5762 g39463 i0 98.171 3.81065088757396 164 3 97 0 6 169 653 490 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36760), mRNA blastn 644 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13123739 13123739 PRJNA270367_P_NODE_19531_length_274_cov_2.320000_g19326_i0 PRJNA270367 19531 274 2.32 6.3568 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 278 3.8100000000000005e-70   NTclustered gi|290995790|ref|XM_002680420.1| 5762 g19326 i0 85.036 75.492700729927 274 39 99 2 1 273 1061 789 Naegleria gruberi vacuolar ATP synthase subunit B (NAEGRDRAFT_55664), mRNA blastn 20685 278 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13123903 13123903 PRJNA270367_P_NODE_34611_length_185_cov_1.514706_g34406_i0 PRJNA270367 34611 185 1.514706 2.8022061 Angomonas deanei 59799 Euglenozoa other_Eukaryota 204 4.119999999999999e-48   NTclustered gi|242133530|gb|GQ153664.1| 59799 g34406 i0 86.486 28.8432432432432 185 25 100 0 1 185 2974 3158 Crithidia sp. ATCC 30255 clone fosmid 6b12 genomic sequence blastn 5336 204 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
15672835 15672835 PRJNA270367_P_NODE_38793_length_171_cov_0.836066_g38588_i0 PRJNA270367 38793 171 0.836066 1.42967286 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 283 4.67e-72   NTclustered gi|84105380|gb|DQ295211.1| 127150 g38588 i0 96.491 101.994152046784 171 6 100 0 1 171 771 941 Rhynchomonas nasuta alpha tubulin 1 gene, partial cds blastn 17441 283 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
16947425 16947425 PRJNA270367_P_NODE_31974_length_195_cov_1.424658_g31769_i0 PRJNA270367 31974 195 1.424658 2.7780831 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 128 2.72e-25   NTclustered gi|2119421993|ref|XM_044690502.1| 51637 g31769 i0 81.935 2.4 155 24 78 4 39 191 1908 1756 Naegleria lovaniensis uncharacterized protein (C9374_014507), partial mRNA blastn 468 128 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
18221865 18221865 PRJNA270367_P_NODE_44335_length_164_cov_0.904348_g44130_i0 PRJNA270367 44335 164 0.904348 1.48313072 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 91.6 2.9e-14   NTclustered gi|290979179|ref|XM_002672266.1| 5762 g44130 i0 83.505 0.591463414634146 97 16 59 0 11 107 947 1043 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_52264), partial mRNA blastn 97 91.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19496002 19496002 PRJNA270367_P_NODE_31136_length_199_cov_1.040000_g30931_i0 PRJNA270367 31136 199 1.04 2.0696 Bodo saltans 75058 Euglenozoa other_Eukaryota 213 7.49e-51   NTclustered gi|301014698|gb|GQ377700.1| 75058 g30931 i0 85.93 11.78391959799 199 28 100 0 1 199 406 208 Bodo saltans ribosomal protein S23a (rps23a) mRNA, complete cds blastn 2345 213 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
20771641 20771641 PRJNA270367_P_NODE_44877_length_164_cov_0.904348_g44672_i0 PRJNA270367 44877 164 0.904348 1.48313072 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 106 1.04e-18   NTclustered gi|290996699|ref|XM_002680874.1| 5762 g44672 i0 79.221 4.03658536585366 154 30 93 2 6 158 342 190 Naegleria gruberi mitochondrial chaperonin cpn60 (NAEGRDRAFT_35568), partial mRNA blastn 662 106 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23322001 23322001 PRJNA270367_P_NODE_24479_length_233_cov_1.695652_g24274_i0 PRJNA270367 24479 233 1.695652 3.95086916 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 135 2.0100000000000003e-27   NTclustered gi|2794833687|ref|XM_067900318.1| 2761500 g24274 i0 82.692 33.9484978540773 156 23 66 4 1 154 245 398 Porcisia hertigi uncharacterized protein (JKF63_04332), partial mRNA blastn 7910 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
23322042 23322042 PRJNA270367_P_NODE_27859_length_214_cov_1.296970_g27654_i0 PRJNA270367 27859 214 1.29697 2.7755158 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 340 3.59e-89   NTclustered gi|290975864|ref|XM_002670616.1| 5762 g27654 i0 95.349 14.4485981308411 215 8 100 2 1 214 470 683 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55913), mRNA blastn 3092 340 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23322144 23322144 PRJNA270367_P_NODE_38399_length_172_cov_1.268293_g38194_i0 PRJNA270367 38399 172 1.268293 2.18146396 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 158 2.9699999999999993e-34   NTclustered gi|2031921538|emb|OD955557.1| 5763 g38194 i0 83.237 7.02325581395349 173 27 100 2 1 172 7140 7311 Naegleria fowleri Karachi_NF001 strain blastn 1208 158 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
23322185 23322185 PRJNA270367_P_NODE_42419_length_166_cov_0.888889_g42214_i0 PRJNA270367 42419 166 0.888889 1.47555574 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 54.7 0.004   NTclustered gi|290994125|ref|XM_002679637.1| 5762 g42214 i0 100 0.403614457831325 29 0 17 0 98 126 14017 14045 Naegleria gruberi midasin (NAEGRDRAFT_78945), partial mRNA blastn 67 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;