RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA270367" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA270367 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370147 370147 PRJNA270367_P_NODE_40921_length_168_cov_0.873950_g40716_i0 PRJNA270367 40921 168 0.87395 1.468236 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 132 1.7600000000000002e-26   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g40716 i0 94.253 44.3928571428571 87 4 52 1 18 104 2001875 2001960 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 7458 132 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
18221870 18221870 PRJNA270367_P_NODE_44715_length_164_cov_0.904348_g44510_i0 PRJNA270367 44715 164 0.904348 1.48313072 Dolichospermum sp. DL01 2717871 Bacteria Bacteria 52.8 0.014   NTclustered gi|2004368895|gb|CP050884.1| 2717871 g44510 i0 100 0.170731707317073 28 0 17 0 77 104 641367 641394 MAG: Dolichospermum sp. DL01 chromosome, complete genome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Dolichospermum Dolichospermum sp. DL01
22046578 22046578 PRJNA270367_P_NODE_30178_length_203_cov_1.012987_g29973_i0 PRJNA270367 30178 203 1.012987 2.05636361 Synechococcus sp. A15-28 1050638 Bacteria Bacteria 60.2 1.06e-4   NTclustered gi|1895742380|gb|CP047931.1| 1050638 g29973 i0 97.143 0.172413793103448 35 1 17 0 110 144 1646324 1646358 Synechococcus sp. A15-28 chromosome, complete genome blastn 35 60.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. A15-28

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;