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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA263496" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
368943 368943 PRJNA263496_P_NODE_10941_length_238_cov_1.026455_g10688_i0 PRJNA263496 10941 238 1.026455 2.4429629 Adineta vaga 104782 Rotifera other_Eukaryota 412 8.51e-111   NTclustered gi|259129963|gb|GQ398061.1| 104782 g10688 i0 97.908 73.7563025210084 239 3 100 2 1 238 4411 4174 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 17554 412 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
369605 369605 PRJNA263496_P_NODE_8061_length_281_cov_2.672414_g7808_i0 PRJNA263496 8061 281 2.672414 7.50948334 Rotaria rotatoria 231624 Rotifera other_Eukaryota 287 6.520000000000001e-73   NTclustered gi|270267490|ref|NC_013568.1| 231624 g7808 i0 85.612 24.1779359430605 278 35 99 5 1 277 2150 2423 Rotaria rotatoria mitochondrion, complete genome blastn 6794 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
3607710 3607710 PRJNA263496_P_NODE_18783_length_179_cov_1.223077_g18530_i0 PRJNA263496 18783 179 1.223077 2.18930783 Brachionus 10194 Rotifera other_Eukaryota 137 4.07e-28   NTclustered gi|307640140|gb|GQ894748.1| 183145 g18530 i0 84.892 49.340782122905 139 17 77 4 2 138 144 8 Brachionus sp. Almenara isolate 7C29 large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 8832 137 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus sp. Almenara
6746754 6746754 PRJNA263496_P_NODE_12426_length_222_cov_1.768786_g12173_i0 PRJNA263496 12426 222 1.768786 3.92670492 Adineta vaga 104782 Rotifera other_Eukaryota 274 3.86e-69   NTclustered gi|187233663|gb|EU643498.1| 104782 g12173 i0 89.091 1.33333333333333 220 24 99 0 3 222 136 355 Adineta vaga ribosomal protein S1a mRNA, partial cds blastn 296 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8022542 8022542 PRJNA263496_P_NODE_15227_length_200_cov_1.350993_g14974_i0 PRJNA263496 15227 200 1.350993 2.701986 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 159 9.95e-35   NTclustered gi|402761777|gb|JX184020.1| 104788 g14974 i0 84.242 0.825 165 24 82 2 2 165 227 64 Macrotrachela quadricornifera isolate CR cytochrome c oxidase subunit 3 (COX3) gene, complete cds; mitochondrial blastn 165 159 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
9297453 9297453 PRJNA263496_P_NODE_24608_length_162_cov_0.902655_g24355_i0 PRJNA263496 24608 162 0.902655 1.4623011 Philodina roseola 96448 Rotifera other_Eukaryota 110 7.89e-20   NTclustered gi|209867697|gb|EU637022.1| 96448 g24355 i0 98.387 0.382716049382716 62 1 38 0 2 63 2890 2829 Philodina roseola GM2 ganglioside activator precursor-like protein, tubulin-like protein, cAMP-dependent protein kinase typeII-alpha regulatory subunit-like protein, hypothetical proteins, Hox-6c, ubiquinol-cytochrome c reductase-like protein, hypothetical proteins, CDC23-like protein, exportin 5-like protein, Cezanne 2 protein-like protein, hypothetical protein, cationic amino acid transporter-like proteins, and hypothetical protein genes, complete cds; and RhoGAP-like protein gene, complete sequence blastn 62 110 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
10573692 10573692 PRJNA263496_P_NODE_9829_length_252_cov_1.206897_g9576_i0 PRJNA263496 9829 252 1.206897 3.04138044 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 411 3.269999999999999e-110   NTclustered gi|62362203|gb|AY942841.1| 317012 g9576 i0 96.032 1.63492063492063 252 10 100 0 1 252 354 103 Philodina sp. NPS-2005 guanine nucleotide binding protein beta polypeptide 2-like 1 mRNA, partial cds blastn 412 411 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
11260398 11260398 PRJNA263496_P_NODE_20449_length_170_cov_1.264463_g20196_i0 PRJNA263496 20449 170 1.264463 2.1495871 Eurotatoria 2816136 Rotifera other_Eukaryota 224 2.8499999999999996e-54   NTclustered gi|134141776|gb|EF173252.1| 104782 g20196 i0 91.875 82.9411764705882 160 13 94 0 2 161 498 657 Adineta vaga isolate TZ.1.2 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 14100 226 0.991150442477876 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14398436 14398436 PRJNA263496_P_NODE_25392_length_161_cov_0.910714_g25139_i0 PRJNA263496 25392 161 0.910714 1.46624954 Philodina roseola 96448 Rotifera other_Eukaryota 182 1.64e-41   NTclustered gi|194500475|gb|EU850440.1| 96448 g25139 i0 87.037 1.00621118012422 162 19 100 2 1 161 23726 23886 Philodina roseola rho GTPase activating protein, histone H4, histone H3, histone H2B, histone H2Av, cleft lip and palate associated transmembrane, mitochondrial ribosomal protein s22, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, filament protein, nucleolar complex associated protein, hypothetical protein 21, putative GPCR, and hypothetical protein 22 genes, complete cds blastn 162 182 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
18221271 18221271 PRJNA263496_P_NODE_8255_length_277_cov_1.486842_g8002_i0 PRJNA263496 8255 277 1.486842 4.11855234 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 261 3.89e-65   NTclustered gi|402761759|gb|JX184011.1| 104788 g8002 i0 83.755 12.6823104693141 277 43 99 2 2 277 587 312 Macrotrachela quadricornifera isolate MQ cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 3513 261 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
19495559 19495559 PRJNA263496_P_NODE_7976_length_283_cov_1.743590_g7723_i0 PRJNA263496 7976 283 1.74359 4.9343597 Philodina megalotrocha 1234259 Rotifera other_Eukaryota 481 2.81e-131   NTclustered gi|1976325703|gb|MW577596.1| 1234259 g7723 i0 97.509 99 281 7 99 0 3 283 236 516 Philodina megalotrocha isolate RiGrAm.2.1 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 28017 481 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina megalotrocha
22045788 22045788 PRJNA263496_P_NODE_17278_length_187_cov_1.478261_g17025_i0 PRJNA263496 17278 187 1.478261 2.76434807 Philodina plena 563911 Rotifera other_Eukaryota 265 1.89e-66   NTclustered gi|209405829|gb|EU751137.1| 563911 g17025 i0 94.22 95.9839572192513 173 10 93 0 4 176 2 174 Philodina plena isolate TU.j.1 cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial blastn 17949 265 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina plena
22046226 22046226 PRJNA263496_P_NODE_9438_length_257_cov_1.865385_g9185_i0 PRJNA263496 9438 257 1.865385 4.79403945 Adineta vaga 104782 Rotifera other_Eukaryota 248 2.78e-61   NTclustered gi|403492623|gb|JX193050.1| 104782 g9185 i0 90.426 18.2295719844358 188 18 73 0 1 188 712 525 Adineta vaga isolate BE1C1 alpha tubulin gene, partial cds blastn 4685 248 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
24595641 24595641 PRJNA263496_P_NODE_3260_length_490_cov_4.950113_g3007_i0 PRJNA263496 3260 490 4.950113 24.2555537 Philodina citrina 468664 Rotifera other_Eukaryota 603 1.0499999999999999e-167   NTclustered gi|407227484|emb|FR856884.1| 468664 g3007 i0 89.648 27.9326530612245 483 37 97 11 14 490 1678 2153 Philodina citrina complete mitochondrial genome blastn 13687 603 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;