contig_metadata
55 rows where analysis = "blastn", bioproject = "PRJNA263496" and tax_phylum = "Pseudomonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1057255 | 1057255 | PRJNA263496_P_NODE_18401_length_181_cov_1.159091_g18148_i0 | PRJNA263496 | 18401 | 181 | 1.159091 | 2.09795471 | Bosea | 85413 | Bacteria | Bacteria | 335 | 1.36e-87 | NTclustered | gi|2512670175|gb|CP126307.1| | 151416 | g18148 | i0 | 100 | 177.364640883978 | 181 | 0 | 100 | 0 | 1 | 181 | 3139425 | 3139245 | Bosea vestrisii strain A18/4-2 chromosome, complete genome | blastn | 32103 | 335 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bosea | Bosea vestrisii | ||
| 1057258 | 1057258 | PRJNA263496_P_NODE_23561_length_164_cov_0.886957_g23308_i0 | PRJNA263496 | 23561 | 164 | 0.886957 | 1.45460948 | Enterobacterales | 91347 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|2640236112|gb|PP038030.1| | 558 | g23308 | i0 | 100 | 128.981707317073 | 164 | 0 | 100 | 0 | 1 | 164 | 18 | 181 | Erwinia sp. strain HBB12-2R 16S ribosomal RNA gene, partial sequence | blastn | 21153 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Erwinia | Erwinia sp. | ||
| 1057259 | 1057259 | PRJNA263496_P_NODE_24141_length_163_cov_0.894737_g23888_i0 | PRJNA263496 | 24141 | 163 | 0.894737 | 1.45842131 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 296 | 5.68e-76 | NTclustered | gi|2229942309|gb|CP095766.1| | 489632 | g23888 | i0 | 99.387 | 39.5644171779141 | 163 | 1 | 100 | 0 | 1 | 163 | 1982768 | 1982930 | Ectopseudomonas chengduensis strain T1624 chromosome, complete genome | blastn | 6449 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas chengduensis | ||
| 1644191 | 1644191 | PRJNA263496_P_NODE_23302_length_164_cov_0.886957_g23049_i0 | PRJNA263496 | 23302 | 164 | 0.886957 | 1.45460948 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|1344832520|gb|CP026711.1| | 470 | g23049 | i0 | 100 | 100 | 164 | 0 | 100 | 0 | 1 | 164 | 714045 | 713882 | Acinetobacter baumannii strain AR_0063 chromosome, complete genome | blastn | 16400 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 2332484 | 2332484 | PRJNA263496_P_NODE_23942_length_163_cov_0.894737_g23689_i0 | PRJNA263496 | 23942 | 163 | 0.894737 | 1.45842131 | Sphaerotilaceae | 2975441 | Bacteria | Bacteria | 239 | 9.72e-59 | NTclustered | gi|2575803384|emb|OY729424.1| | 452440 | g23689 | i0 | 94.771 | 79.1226993865031 | 153 | 8 | 94 | 0 | 11 | 163 | 5336860 | 5336708 | MAG: uncultured Paucibacter sp. isolate 16becde1-7ee0-41cf-90b4-78e093466c12 genome assembly, chromosome: 1 | blastn | 12897 | 239 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | uncultured Roseateles sp. | ||
| 3607707 | 3607707 | PRJNA263496_P_NODE_11603_length_230_cov_1.243094_g11350_i0 | PRJNA263496 | 11603 | 230 | 1.243094 | 2.8591162 | Shewanella | 22 | Bacteria | Bacteria | 399 | 6.369999999999998e-107 | NTclustered | gi|117610791|gb|CP000469.1| | 94122 | g11350 | i0 | 98.667 | 786.126086956522 | 225 | 3 | 98 | 0 | 1 | 225 | 4477454 | 4477678 | Shewanella sp. ANA-3 chromosome 1, complete sequence | blastn | 180809 | 399 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella sp. ANA-3 | ||
| 3607712 | 3607712 | PRJNA263496_P_NODE_21503_length_167_cov_0.864407_g21250_i0 | PRJNA263496 | 21503 | 167 | 0.864407 | 1.44355969 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 303 | 3.5e-78 | NTclustered | gi|2556949428|gb|CP104383.1| | 329 | g21250 | i0 | 99.401 | 28 | 167 | 1 | 100 | 0 | 1 | 167 | 140197 | 140363 | Ralstonia pickettii strain MCR plasmid pRp12D0, complete sequence | blastn | 4676 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia pickettii | ||
| 3607715 | 3607715 | PRJNA263496_P_NODE_24843_length_162_cov_0.902655_g24590_i0 | PRJNA263496 | 24843 | 162 | 0.902655 | 1.4623011 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 289 | 9.44e-74 | NTclustered | gi|2798691846|gb|CP166923.2| | 301 | g24590 | i0 | 98.765 | 18.4012345679012 | 162 | 2 | 100 | 0 | 1 | 162 | 4404654 | 4404815 | Ectopseudomonas oleovorans strain ERA chromosome, complete genome | blastn | 2981 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas oleovorans | ||
| 4885190 | 4885190 | PRJNA263496_P_NODE_16344_length_193_cov_1.159722_g16091_i0 | PRJNA263496 | 16344 | 193 | 1.159722 | 2.23826346 | Paracoccaceae | 31989 | Bacteria | Bacteria | 305 | 1.16e-78 | NTclustered | gi|2441587687|gb|CP067129.1| | 184748 | g16091 | i0 | 96.257 | 176.720207253886 | 187 | 5 | 96 | 2 | 1 | 186 | 9304 | 9489 | Paracoccus seriniphilus strain DSM 14827 chromosome, complete genome | blastn | 34107 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus seriniphilus | ||
| 4885192 | 4885192 | PRJNA263496_P_NODE_4364_length_407_cov_4.561453_g4111_i0 | PRJNA263496 | 4364 | 407 | 4.561453 | 18.56511371 | Moraxellaceae | 468 | Bacteria | Bacteria | 752 | 0 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g4111 | i0 | 100 | 389.142506142506 | 407 | 0 | 100 | 0 | 1 | 407 | 2079261 | 2079667 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 158381 | 752 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 5472995 | 5472995 | PRJNA263496_P_NODE_8105_length_280_cov_2.575758_g7852_i0 | PRJNA263496 | 8105 | 280 | 2.575758 | 7.2121224 | Candidatus Branchiomonas cystocola | 1125007 | Bacteria | Bacteria | 340 | 4.919999999999999e-89 | NTclustered | gi|2391584828|gb|OP962438.1| | 1125007 | g7852 | i0 | 89.17 | 281.746428571429 | 277 | 25 | 99 | 3 | 1 | 277 | 1054 | 1325 | Candidatus Branchiomonas cysticola clone LB220920 F4 23S ribosomal RNA gene, partial sequence | blastn | 78889 | 340 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Candidatus Branchiomonas | Candidatus Branchiomonas cystocola | |||
| 6159992 | 6159992 | PRJNA263496_P_NODE_11285_length_233_cov_1.722826_g11032_i0 | PRJNA263496 | 11285 | 233 | 1.722826 | 4.01418458 | Pseudomonadota | 1224 | Bacteria | Bacteria | 425 | 1.07e-114 | NTclustered | gi|2296133543|gb|OP393541.1| | 479 | g11032 | i0 | 99.571 | 108.974248927039 | 233 | 1 | 100 | 0 | 1 | 233 | 233 | 1 | Moraxella sp. strain Cco2-ST-1 16S ribosomal RNA gene, partial sequence | blastn | 25391 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 6159999 | 6159999 | PRJNA263496_P_NODE_7805_length_287_cov_1.529412_g7552_i0 | PRJNA263496 | 7805 | 287 | 1.529412 | 4.38941244 | Brevundimonas | 41275 | Bacteria | Bacteria | 505 | 1.69e-138 | NTclustered | gi|1004607118|gb|KT865826.1| | 1811262 | g7552 | i0 | 98.596 | 175.296167247387 | 285 | 4 | 99 | 0 | 1 | 285 | 1047 | 1331 | Brevundimonas sp. ALBL_118 23S ribosomal RNA gene, partial sequence | blastn | 50310 | 505 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas sp. ALBL_118 | ||
| 6746729 | 6746729 | PRJNA263496_P_NODE_11606_length_230_cov_1.165746_g11353_i0 | PRJNA263496 | 11606 | 230 | 1.165746 | 2.6812158 | Pseudomonadaceae bacterium T75 | 3003241 | Bacteria | Bacteria | 403 | 4.92e-108 | NTclustered | gi|2381551845|gb|CP113226.1| | 3003241 | g11353 | i0 | 98.261 | 515.113043478261 | 230 | 4 | 100 | 0 | 1 | 230 | 1069584 | 1069355 | Pseudomonadaceae bacterium T75 chromosome, complete genome | blastn | 118476 | 403 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonadaceae bacterium T75 | |||
| 6747129 | 6747129 | PRJNA263496_P_NODE_24826_length_162_cov_0.902655_g24573_i0 | PRJNA263496 | 24826 | 162 | 0.902655 | 1.4623011 | Roseomonas cutis | 2897332 | Bacteria | Bacteria | 163 | 5.97e-36 | NTclustered | gi|2156612837|gb|CP087719.1| | 2897332 | g24573 | i0 | 90.984 | 9.56172839506173 | 122 | 10 | 75 | 1 | 1 | 121 | 1611788 | 1611667 | Roseomonas cutis strain OT10 chromosome, complete genome | blastn | 1549 | 163 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Roseomonadaceae | Roseomonas | Roseomonas cutis | ||
| 8709906 | 8709906 | PRJNA263496_P_NODE_19967_length_172_cov_1.691057_g19714_i0 | PRJNA263496 | 19967 | 172 | 1.691057 | 2.90861804 | Acidovorax | 12916 | Bacteria | Bacteria | 291 | 2.81e-74 | NTclustered | gi|1004607049|gb|KT865757.1| | 12917 | g19714 | i0 | 97.11 | 320.872093023256 | 173 | 3 | 100 | 2 | 1 | 172 | 275 | 104 | Acidovorax facilis strain DSM 649 23S ribosomal RNA gene, partial sequence | blastn | 55190 | 291 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax facilis | ||
| 8709908 | 8709908 | PRJNA263496_P_NODE_21407_length_167_cov_0.864407_g21154_i0 | PRJNA263496 | 21407 | 167 | 0.864407 | 1.44355969 | Pseudomonas | 286 | Bacteria | Bacteria | 298 | 1.63e-76 | NTclustered | gi|2703326990|gb|CP148752.1| | 294 | g21154 | i0 | 98.802 | 100 | 167 | 2 | 100 | 0 | 1 | 167 | 5714216 | 5714382 | Pseudomonas fluorescens strain AB1 chromosome, complete genome | blastn | 16700 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 8709909 | 8709909 | PRJNA263496_P_NODE_21847_length_166_cov_0.871795_g21594_i0 | PRJNA263496 | 21847 | 166 | 0.871795 | 1.4471797 | Brevundimonas | 41275 | Bacteria | Bacteria | 113 | 6.290000000000001e-21 | NTclustered | gi|2713775843|gb|CP150643.1| | 293 | g21594 | i0 | 79.29 | 6 | 169 | 29 | 100 | 3 | 1 | 166 | 1388661 | 1388826 | Brevundimonas diminuta strain HAU429 chromosome, complete genome | blastn | 996 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas diminuta | ||
| 9297594 | 9297594 | PRJNA263496_P_NODE_5668_length_347_cov_1.419463_g5415_i0 | PRJNA263496 | 5668 | 347 | 1.419463 | 4.92553661 | Massilia sp. NP310 | 2861282 | Bacteria | Bacteria | 534 | 2.679999999999999e-147 | NTclustered | gi|2075576740|gb|CP080379.1| | 2861282 | g5415 | i0 | 95.77 | 491.504322766571 | 331 | 14 | 95 | 0 | 17 | 347 | 3873719 | 3873389 | Massilia sp. NP310 chromosome, complete genome | blastn | 170552 | 534 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. NP310 | ||
| 9985310 | 9985310 | PRJNA263496_P_NODE_23928_length_163_cov_0.894737_g23675_i0 | PRJNA263496 | 23928 | 163 | 0.894737 | 1.45842131 | Brucella | 234 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2293240145|gb|CP103345.1| | 529 | g23675 | i0 | 100 | 100.546012269939 | 163 | 0 | 100 | 0 | 1 | 163 | 1882264 | 1882426 | Brucella anthropi strain CGMCC 1.17299 chromosome 1, complete sequence | blastn | 16389 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 11260395 | 11260395 | PRJNA263496_P_NODE_16169_length_194_cov_1.331034_g15916_i0 | PRJNA263496 | 16169 | 194 | 1.331034 | 2.58220596 | Chitinibacter | 230666 | Bacteria | Bacteria | 353 | 4.1e-93 | NTclustered | gi|1874476854|gb|CP058952.1| | 1737446 | g15916 | i0 | 99.485 | 164 | 194 | 1 | 100 | 0 | 1 | 194 | 573002 | 572809 | Chitinibacter fontanus strain STM-7 chromosome, complete genome | blastn | 31816 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chitinibacteraceae | Chitinibacter | Chitinibacter fontanus | ||
| 13123225 | 13123225 | PRJNA263496_P_NODE_25131_length_162_cov_0.893805_g24878_i0 | PRJNA263496 | 25131 | 162 | 0.893805 | 1.4479641 | Erythrobacter neustonensis | 1112 | Bacteria | Bacteria | 122 | 1.0099999999999999e-23 | NTclustered | gi|1036419962|gb|CP016033.1| | 1112 | g24878 | i0 | 84.677 | 3.24691358024691 | 124 | 17 | 76 | 2 | 35 | 157 | 2946406 | 2946528 | Erythrobacter neustonensis strain DSM 9434 chromosome, complete genome | blastn | 526 | 122 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Erythrobacter | Erythrobacter neustonensis | ||
| 13810645 | 13810645 | PRJNA263496_P_NODE_15851_length_196_cov_1.387755_g15598_i0 | PRJNA263496 | 15851 | 196 | 1.387755 | 2.7199998 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 363 | 6.899999999999998e-96 | NTclustered | gi|2788828237|gb|CP166818.1| | 287 | g15598 | i0 | 100 | 317.045918367347 | 196 | 0 | 100 | 0 | 1 | 196 | 260423 | 260228 | Pseudomonas aeruginosa strain M7242404 plasmid p1-M7242404, complete sequence | blastn | 62141 | 363 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 13810649 | 13810649 | PRJNA263496_P_NODE_21311_length_167_cov_0.864407_g21058_i0 | PRJNA263496 | 21311 | 167 | 0.864407 | 1.44355969 | Moraxellaceae | 468 | Bacteria | Bacteria | 303 | 3.5e-78 | NTclustered | gi|1282077041|gb|CP024185.2| | 34062 | g21058 | i0 | 99.401 | 16 | 167 | 1 | 100 | 0 | 1 | 167 | 2247903 | 2248069 | Moraxella osloensis strain TT16 chromosome, complete genome | blastn | 2672 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 14398443 | 14398443 | PRJNA263496_P_NODE_25612_length_161_cov_0.910714_g25359_i0 | PRJNA263496 | 25612 | 161 | 0.910714 | 1.46624954 | Rhizobium oryzihabitans | 2267833 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1810211087|gb|CP048635.1| | 2267833 | g25359 | i0 | 100 | 28.1366459627329 | 161 | 0 | 100 | 0 | 1 | 161 | 1525871 | 1525711 | Rhizobium oryzihabitans strain M15 chromosome M15-12, complete sequence | blastn | 4530 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium oryzihabitans | ||
| 15084767 | 15084767 | PRJNA263496_P_NODE_14752_length_203_cov_1.766234_g14499_i0 | PRJNA263496 | 14752 | 203 | 1.766234 | 3.58545502 | Moraxellaceae | 468 | Bacteria | Bacteria | 337 | 4.3599999999999994e-88 | NTclustered | gi|2324910687|gb|CP087817.1| | 476 | g14499 | i0 | 96.552 | 358.009852216749 | 203 | 7 | 100 | 0 | 1 | 203 | 78799 | 79001 | Moraxella bovis strain SAM109237 chromosome, complete genome | blastn | 72676 | 337 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella bovis | ||
| 15084772 | 15084772 | PRJNA263496_P_NODE_20292_length_171_cov_1.008197_g20039_i0 | PRJNA263496 | 20292 | 171 | 1.008197 | 1.72401687 | Roseomonas | 125216 | Bacteria | Bacteria | 272 | 1.01e-68 | NTclustered | gi|2329626551|gb|CP034924.1| | 207340 | g20039 | i0 | 96.386 | 339.859649122807 | 166 | 4 | 96 | 2 | 7 | 171 | 218438 | 218274 | Roseomonas mucosa strain HV1 chromosome, complete genome | blastn | 58116 | 272 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Roseomonadaceae | Roseomonas | Roseomonas mucosa | ||
| 15084779 | 15084779 | PRJNA263496_P_NODE_5372_length_358_cov_3.433657_g5119_i0 | PRJNA263496 | 5372 | 358 | 3.433657 | 12.29249206 | Acinetobacter | 469 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|76152395|gb|DQ188904.1| | 28090 | g5119 | i0 | 99.438 | 574.974860335196 | 356 | 2 | 99 | 0 | 1 | 356 | 1240 | 885 | Acinetobacter lwoffii 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 205841 | 652 | 0.992331288343558 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 15084781 | 15084781 | PRJNA263496_P_NODE_6472_length_322_cov_1.802198_g6219_i0 | PRJNA263496 | 6472 | 322 | 1.802198 | 5.80307756 | Moraxellaceae | 468 | Bacteria | Bacteria | 595 | 1.1099999999999995e-165 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g6219 | i0 | 100 | 376.509316770186 | 322 | 0 | 100 | 0 | 1 | 322 | 1496236 | 1496557 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 121236 | 595 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 15084784 | 15084784 | PRJNA263496_P_NODE_9532_length_256_cov_1.251208_g9279_i0 | PRJNA263496 | 9532 | 256 | 1.251208 | 3.20309248 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 473 | 4.189999999999999e-129 | NTclustered | gi|2459474170|gb|CP119520.1| | 34071 | g9279 | i0 | 100 | 504.9296875 | 256 | 0 | 100 | 0 | 1 | 256 | 1082639 | 1082894 | Telluria mixta strain ACM 1762 chromosome, complete genome | blastn | 129262 | 473 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Telluria | Telluria mixta | ||
| 15671765 | 15671765 | PRJNA263496_P_NODE_12193_length_224_cov_1.571429_g11940_i0 | PRJNA263496 | 12193 | 224 | 1.571429 | 3.52000096 | Hylemonella gracilis | 80880 | Bacteria | Bacteria | 392 | 1.0299999999999999e-104 | NTclustered | gi|1586158954|gb|CP031395.1| | 80880 | g11940 | i0 | 98.222 | 298.044642857143 | 225 | 3 | 100 | 1 | 1 | 224 | 392372 | 392148 | Hylemonella gracilis strain NS1 chromosome | blastn | 66762 | 392 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hylemonella | Hylemonella gracilis | ||
| 15672096 | 15672096 | PRJNA263496_P_NODE_23373_length_164_cov_0.886957_g23120_i0 | PRJNA263496 | 23373 | 164 | 0.886957 | 1.45460948 | Methylobacterium fujisawaense | 107400 | Bacteria | Bacteria | 110 | 8.01e-20 | NTclustered | gi|2731892031|gb|CP155003.1| | 107400 | g23120 | i0 | 79.355 | 0.945121951219512 | 155 | 32 | 95 | 0 | 1 | 155 | 5728 | 5574 | Methylobacterium fujisawaense strain C14 plasmid unnamed4 | blastn | 155 | 110 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium fujisawaense | ||
| 17634828 | 17634828 | PRJNA263496_P_NODE_22894_length_165_cov_0.879310_g22641_i0 | PRJNA263496 | 22894 | 165 | 0.87931 | 1.4508615 | Serratia | 613 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1216698135|gb|CP018930.1| | 615 | g22641 | i0 | 100 | 100 | 165 | 0 | 100 | 0 | 1 | 165 | 3490308 | 3490472 | Serratia marcescens strain UMH12, complete genome | blastn | 16500 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia marcescens | ||
| 18220970 | 18220970 | PRJNA263496_P_NODE_21315_length_167_cov_0.864407_g21062_i0 | PRJNA263496 | 21315 | 167 | 0.864407 | 1.44355969 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2470454228|gb|CP113071.1| | 470 | g21062 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 1620160 | 1619994 | Acinetobacter baumannii strain A118 DeltaH0N27_10830::kan chromosome, complete genome | blastn | 16700 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 18221089 | 18221089 | PRJNA263496_P_NODE_25715_length_161_cov_0.910714_g25462_i0 | PRJNA263496 | 25715 | 161 | 0.910714 | 1.46624954 | Rhizobium oryzihabitans | 2267833 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1810208023|gb|CP048632.1| | 2267833 | g25462 | i0 | 100 | 84.7204968944099 | 161 | 0 | 100 | 0 | 1 | 161 | 943421 | 943581 | Rhizobium oryzihabitans strain M15 chromosome M15-11, complete sequence | blastn | 13640 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium oryzihabitans | ||
| 18908646 | 18908646 | PRJNA263496_P_NODE_22655_length_165_cov_0.879310_g22402_i0 | PRJNA263496 | 22655 | 165 | 0.87931 | 1.4508615 | Devosia | 46913 | Bacteria | Bacteria | 296 | 5.77e-76 | NTclustered | gi|1345381316|gb|CP026747.1| | 2083786 | g22402 | i0 | 99.387 | 179.072727272727 | 163 | 1 | 99 | 0 | 3 | 165 | 1098294 | 1098456 | Devosia sp. I507 chromosome, complete genome | blastn | 29547 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Devosiaceae | Devosia | Devosia sp. I507 | ||
| 18908647 | 18908647 | PRJNA263496_P_NODE_23135_length_164_cov_0.886957_g22882_i0 | PRJNA263496 | 23135 | 164 | 0.886957 | 1.45460948 | Acinetobacter | 469 | Bacteria | Bacteria | 294 | 2.06e-75 | NTclustered | gi|1345385131|gb|CP026761.1| | 470 | g22882 | i0 | 99.383 | 98.8536585365854 | 162 | 1 | 99 | 0 | 1 | 162 | 3260103 | 3260264 | Acinetobacter baumannii strain AR_0078 chromosome, complete genome | blastn | 16212 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 18908650 | 18908650 | PRJNA263496_P_NODE_25655_length_161_cov_0.910714_g25402_i0 | PRJNA263496 | 25655 | 161 | 0.910714 | 1.46624954 | Limnobacter | 131079 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2591690181|dbj|AP028947.1| | 131080 | g25402 | i0 | 100 | 115.086956521739 | 161 | 0 | 100 | 0 | 1 | 161 | 509868 | 510028 | Limnobacter thiooxidans CS-K2 DNA, complete genome | blastn | 18529 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Limnobacter | Limnobacter thiooxidans | ||
| 19495346 | 19495346 | PRJNA263496_P_NODE_25476_length_161_cov_0.910714_g25223_i0 | PRJNA263496 | 25476 | 161 | 0.910714 | 1.46624954 | Vibrio diabolicus | 50719 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2781076018|gb|CP162907.1| | 50719 | g25223 | i0 | 100 | 72.4285714285714 | 161 | 0 | 100 | 0 | 1 | 161 | 887154 | 886994 | Vibrio diabolicus strain 3098 chromosome 1, complete sequence | blastn | 11661 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio diabolicus | ||
| 20183294 | 20183294 | PRJNA263496_P_NODE_23536_length_164_cov_0.886957_g23283_i0 | PRJNA263496 | 23536 | 164 | 0.886957 | 1.45460948 | Kushneria | 504090 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|1197436195|gb|CP021358.1| | 157779 | g23283 | i0 | 100 | 2 | 164 | 0 | 100 | 0 | 1 | 164 | 1985363 | 1985526 | Kushneria marisflavi strain SW32, complete genome | blastn | 328 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Kushneria | Kushneria marisflavi | ||
| 20183295 | 20183295 | PRJNA263496_P_NODE_24176_length_163_cov_0.894737_g23923_i0 | PRJNA263496 | 24176 | 163 | 0.894737 | 1.45842131 | Escherichia | 561 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g23923 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 2365406 | 2365568 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20770638 | 20770638 | PRJNA263496_P_NODE_15597_length_198_cov_0.993289_g15344_i0 | PRJNA263496 | 15597 | 198 | 0.993289 | 1.96671222 | Sterolibacterium denitrificans | 157592 | Bacteria | Bacteria | 267 | 5.63e-67 | NTclustered | gi|1320617321|emb|LT837803.1| | 157592 | g15344 | i0 | 90.955 | 252.671717171717 | 199 | 17 | 100 | 1 | 1 | 198 | 1391154 | 1390956 | Sterolibacterium denitrificans strain Chol genome assembly, chromosome: SDENCHOL | blastn | 50029 | 267 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Sterolibacterium | Sterolibacterium denitrificans | ||
| 20770833 | 20770833 | PRJNA263496_P_NODE_22477_length_165_cov_0.879310_g22224_i0 | PRJNA263496 | 22477 | 165 | 0.87931 | 1.4508615 | Moraxella sp. K23 | 3149047 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2740869040|dbj|AP031595.1| | 3149047 | g22224 | i0 | 100 | 15.2848484848485 | 165 | 0 | 100 | 0 | 1 | 165 | 1769011 | 1768847 | Moraxella sp. K23 DNA, complete genome | blastn | 2522 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. K23 | ||
| 20770840 | 20770840 | PRJNA263496_P_NODE_22777_length_165_cov_0.879310_g22524_i0 | PRJNA263496 | 22777 | 165 | 0.87931 | 1.4508615 | Pseudomonas sihuiensis | 1274359 | Bacteria | Bacteria | 300 | 4.46e-77 | NTclustered | gi|1086053277|emb|LT629797.1| | 1274359 | g22524 | i0 | 99.394 | 14.6545454545455 | 165 | 1 | 100 | 0 | 1 | 165 | 393211 | 393047 | Pseudomonas sihuiensis strain KCTC 32246 genome assembly, chromosome: I | blastn | 2418 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sihuiensis | ||
| 21458952 | 21458952 | PRJNA263496_P_NODE_25377_length_161_cov_0.910714_g25124_i0 | PRJNA263496 | 25377 | 161 | 0.910714 | 1.46624954 | Pseudomonas | 286 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1797741011|dbj|AP022324.1| | 303 | g25124 | i0 | 100 | 99.7763975155279 | 161 | 0 | 100 | 0 | 1 | 161 | 559858 | 560018 | Pseudomonas putida TS312 DNA, complete genome | blastn | 16064 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 22045554 | 22045554 | PRJNA263496_P_NODE_10118_length_248_cov_1.261307_g9865_i0 | PRJNA263496 | 10118 | 248 | 1.261307 | 3.12804136 | Bradyrhizobium sp. WD16 | 1521768 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|2265214964|gb|CP028908.1| | 1521768 | g9865 | i0 | 98.79 | 107.991935483871 | 248 | 3 | 100 | 0 | 1 | 248 | 2714207 | 2714454 | Bradyrhizobium sp. WD16 chromosome, complete genome | blastn | 26782 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. WD16 | ||
| 22045911 | 22045911 | PRJNA263496_P_NODE_21958_length_166_cov_0.871795_g21705_i0 | PRJNA263496 | 21958 | 166 | 0.871795 | 1.4471797 | Rhodopseudomonas palustris | 1076 | Bacteria | Bacteria | 139 | 1.04e-28 | NTclustered | gi|90103542|gb|CP000301.1| | 316056 | g21705 | i0 | 83.444 | 8.48192771084337 | 151 | 23 | 90 | 2 | 17 | 166 | 2720070 | 2719921 | Rhodopseudomonas palustris BisB18, complete genome | blastn | 1408 | 139 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Rhodopseudomonas | Rhodopseudomonas palustris | ||
| 22045964 | 22045964 | PRJNA263496_P_NODE_24158_length_163_cov_0.894737_g23905_i0 | PRJNA263496 | 24158 | 163 | 0.894737 | 1.45842131 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2484391000|gb|CP121570.1| | 470 | g23905 | i0 | 100 | 98.5153374233129 | 163 | 0 | 100 | 0 | 1 | 163 | 1575758 | 1575596 | Acinetobacter baumannii strain RAB57 chromosome, complete genome | blastn | 16058 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 24009164 | 24009164 | PRJNA263496_P_NODE_14459_length_205_cov_2.910256_g14206_i0 | PRJNA263496 | 14459 | 205 | 2.910256 | 5.9660248 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 374 | 3.3599999999999997e-99 | NTclustered | gi|1109138823|gb|CP018143.1| | 470 | g14206 | i0 | 99.512 | 574.331707317073 | 205 | 1 | 100 | 0 | 1 | 205 | 21704 | 21500 | Acinetobacter baumannii strain HRAB-85, complete genome | blastn | 117738 | 374 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 24009166 | 24009166 | PRJNA263496_P_NODE_17559_length_186_cov_1.058394_g17306_i0 | PRJNA263496 | 17559 | 186 | 1.058394 | 1.96861284 | Bacteria | 2 | Bacteria | Bacteria | 326 | 8.490000000000001e-85 | NTclustered | gi|2637094706|gb|CP140157.1| | 285 | g17306 | i0 | 98.378 | 304.005376344086 | 185 | 3 | 99 | 0 | 2 | 186 | 1944576 | 1944392 | Comamonas testosteroni strain DSMZ 14576 chromosome, complete genome | blastn | 56545 | 327 | 0.996941896024465 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 24009169 | 24009169 | PRJNA263496_P_NODE_19299_length_176_cov_1.362205_g19046_i0 | PRJNA263496 | 19299 | 176 | 1.362205 | 2.3974808 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 320 | 3.69e-83 | NTclustered | gi|1995442716|gb|CP070865.1| | 24 | g19046 | i0 | 99.432 | 292.176136363636 | 176 | 1 | 100 | 0 | 1 | 176 | 38794 | 38619 | Shewanella putrefaciens strain XY07 chromosome, complete genome | blastn | 51423 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella putrefaciens | ||
| 24595515 | 24595515 | PRJNA263496_P_NODE_22140_length_166_cov_0.871795_g21887_i0 | PRJNA263496 | 22140 | 166 | 0.871795 | 1.4471797 | Klebsiella grimontii | 2058152 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2808198643|gb|CP169721.1| | 2058152 | g21887 | i0 | 100 | 99.7710843373494 | 166 | 0 | 100 | 0 | 1 | 166 | 1551990 | 1551825 | Klebsiella grimontii strain 2750 chromosome, complete genome | blastn | 16562 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella grimontii | ||
| 25283325 | 25283325 | PRJNA263496_P_NODE_11380_length_232_cov_1.530055_g11127_i0 | PRJNA263496 | 11380 | 232 | 1.530055 | 3.5497276 | Burkholderiales | 80840 | Bacteria | Bacteria | 339 | 1.42e-88 | NTclustered | gi|2160204256|gb|CP088081.1| | 36863 | g11127 | i0 | 93.133 | 176.23275862069 | 233 | 12 | 99 | 3 | 2 | 232 | 589000 | 589230 | Ideonella dechloratans strain CCUG 30977 chromosome, complete genome | blastn | 40886 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Ideonella | Ideonella dechloratans | ||
| 25283330 | 25283330 | PRJNA263496_P_NODE_14980_length_202_cov_1.000000_g14727_i0 | PRJNA263496 | 14980 | 202 | 1 | 2.02 | Betaproteobacteria | 28216 | Bacteria | Bacteria | 113 | 7.95e-21 | NTclustered | gi|899748107|gb|CP012020.1| | 1662285 | g14727 | i0 | 77.34 | 126.034653465347 | 203 | 38 | 99 | 7 | 1 | 200 | 2348984 | 2349181 | Methylophilus sp. TWE2, complete genome | blastn | 25459 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus sp. TWE2 | ||
| 25283334 | 25283334 | PRJNA263496_P_NODE_24860_length_162_cov_0.902655_g24607_i0 | PRJNA263496 | 24860 | 162 | 0.902655 | 1.4623011 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2798691846|gb|CP166923.2| | 301 | g24607 | i0 | 100 | 94.7160493827161 | 162 | 0 | 100 | 0 | 1 | 162 | 3823291 | 3823452 | Ectopseudomonas oleovorans strain ERA chromosome, complete genome | blastn | 15344 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas oleovorans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;