RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA263496" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4196327 4196327 PRJNA263496_P_NODE_18084_length_183_cov_1.141791_g17831_i0 PRJNA263496 18084 183 1.141791 2.08947753 Succinea arundinetorum 2981998 Mollusca Mollusca 65.8 2e-6   NTclustered gi|2386966420|ref|NC_068814.1| 2981998 g17831 i0 81.707 0.448087431693989 82 12 44 3 1 80 1275 1355 Succinea arundinetorum mitochondrion, complete genome blastn 82 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Succineidae Succinea Succinea arundinetorum
6746691 6746691 PRJNA263496_P_NODE_10446_length_244_cov_1.225641_g10193_i0 PRJNA263496 10446 244 1.225641 2.99056404 Physella acuta 109671 Mollusca Mollusca 187 5.7799999999999984e-43   NTclustered gi|2572333263|ref|XM_059300495.1| 109671 g10193 i0 81.013 4.70491803278689 237 43 97 2 7 242 350 115 PREDICTED: Physella acuta small ribosomal subunit protein uS11 (LOC131941303), transcript variant X2, mRNA blastn 1148 187 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
9297231 9297231 PRJNA263496_P_NODE_16848_length_190_cov_1.085106_g16595_i0 PRJNA263496 16848 190 1.085106 2.0617014 Octopus sinensis 2607531 Mollusca Mollusca 141 3.39e-29   NTclustered gi|1914670565|ref|XM_029786392.2| 2607531 g16595 i0 88.696 29.8210526315789 115 13 61 0 1 115 1374 1488 PREDICTED: Octopus sinensis tubulin alpha-1A chain (LOC115216810), mRNA blastn 5666 141 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
10573235 10573235 PRJNA263496_P_NODE_17489_length_186_cov_1.481752_g17236_i0 PRJNA263496 17489 186 1.481752 2.75605872 Gigantopelta aegis 1735272 Mollusca Mollusca 104 4.33e-18   NTclustered gi|2034292058|ref|XM_041520502.1| 1735272 g17236 i0 85.859 43.3064516129032 99 12 53 2 61 158 836 739 PREDICTED: Gigantopelta aegis glucose-6-phosphate isomerase-like (LOC121388953), transcript variant X4, mRNA blastn 8055 104 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;