RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA263496" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10573323 10573323 PRJNA263496_P_NODE_20749_length_168_cov_1.714286_g20496_i0 PRJNA263496 20749 168 1.714286 2.88000048 Pseudoloma neurophilia 146866 Fungi Fungi 311 2.11e-80   NTclustered gi|11993647|gb|AF322654.1| 146866 g20496 i0 100 73.7321428571429 168 0 100 0 1 168 1322 1155 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12387 311 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
13123418 13123418 PRJNA263496_P_NODE_8011_length_282_cov_2.175966_g7758_i0 PRJNA263496 8011 282 2.175966 6.13622412 Pseudoloma neurophilia 146866 Fungi Fungi 518 2.13e-142   NTclustered gi|11993647|gb|AF322654.1| 146866 g7758 i0 99.645 98.0567375886525 282 1 100 0 1 282 303 22 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27652 518 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
16946734 16946734 PRJNA263496_P_NODE_24674_length_162_cov_0.902655_g24421_i0 PRJNA263496 24674 162 0.902655 1.4623011 Glugoides intestinalis 174680 Fungi Fungi 143 7.78e-30   NTclustered gi|113470857|gb|DQ680158.2| 174680 g24421 i0 91.429 3.82716049382716 105 7 65 2 52 156 335 233 Glugoides intestinalis isolate Gi3 23S ribosomal RNA gene, partial sequence; 23S-16S ribosomal RNA spacer, complete sequence; and 16S ribosomal RNA gene, partial sequence blastn 620 143 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugoides Glugoides intestinalis
20771131 20771131 PRJNA263496_P_NODE_9277_length_260_cov_0.966825_g9024_i0 PRJNA263496 9277 260 0.966825 2.513745 Pseudoloma neurophilia 146866 Fungi Fungi 477 3.3e-130   NTclustered gi|11993647|gb|AF322654.1| 146866 g9024 i0 99.615 86.3615384615385 260 1 100 0 1 260 514 773 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22454 477 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
21458947 21458947 PRJNA263496_P_NODE_14297_length_206_cov_2.872611_g14044_i0 PRJNA263496 14297 206 2.872611 5.91757866 Enterocytozoonidae 27970 Fungi Fungi 255 1.28e-63   NTclustered gi|1023344233|gb|KU198278.1| 546761 g14044 i0 89.655 97.8252427184466 203 18 99 3 4 206 314 115 Uncultured Enterocytozoonidae isolate EHPAAHL01 small subunit ribosomal RNA gene, partial sequence blastn 20152 257 0.992217898832685 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Enterocytozoonidae
22045683 22045683 PRJNA263496_P_NODE_14018_length_209_cov_0.987500_g13765_i0 PRJNA263496 14018 209 0.9875 2.063875 Obruspora papernae 1341930 Fungi Fungi 147 8.169999999999998e-31   NTclustered gi|573008413|emb|HG005137.1| 1341930 g13765 i0 86.029 0.650717703349282 136 19 65 0 74 209 1479 1614 Obruspora papernae 16S rRNA gene (partial), ITS and 23S rRNA gene (partial), individual 1 blastn 136 147 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Obruspora Obruspora papernae
22045816 22045816 PRJNA263496_P_NODE_18478_length_180_cov_2.526718_g18225_i0 PRJNA263496 18478 180 2.526718 4.5480924 Vavraia culicis 103449 Fungi Fungi 239 1.09e-58   NTclustered gi|667636757|ref|XR_552273.1| 948595 g18225 i0 92.727 15.2166666666667 165 12 92 0 4 168 884 1048 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 2739 239 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;