RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA263496" and tax_phylum = "Ctenophora"

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tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
369326 369326 PRJNA263496_P_NODE_22921_length_165_cov_0.879310_g22668_i0 PRJNA263496 22921 165 0.87931 1.4508615 Euplokamis dunlapae 1403701 Ctenophora other_Eukaryota 178 2.18e-40   NTclustered gi|1064291444|gb|KF317406.2| 1403701 g22668 i0 86.061 2 165 23 100 0 1 165 1705 1869 Euplokamis dunlapae isolate 30591 zf-H2C2_2 domain-containing protein mRNA, complete cds blastn 330 178 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Cydippida Euplokamidae Euplokamis Euplokamis dunlapae
22045563 22045563 PRJNA263496_P_NODE_10358_length_245_cov_1.561224_g10105_i0 PRJNA263496 10358 245 1.561224 3.8249988 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 281 2.59e-71   NTclustered gi|2700947974|ref|XM_063835056.1| 2820187 g10105 i0 87.603 6.32244897959184 242 30 99 0 4 245 302 61 PREDICTED: Bolinopsis microptera large ribosomal subunit protein eL19-like (LOC134823541), mRNA blastn 1549 281 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
23321379 23321379 PRJNA263496_P_NODE_23799_length_163_cov_1.342105_g23546_i0 PRJNA263496 23799 163 1.342105 2.18763115 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 161 2.16e-35   NTclustered gi|2700945204|ref|XM_063833603.1| 2820187 g23546 i0 85 3.47239263803681 160 22 98 2 5 163 849 1007 PREDICTED: Bolinopsis microptera large ribosomal subunit protein uL3-like (LOC134822490), mRNA blastn 566 161 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
23321524 23321524 PRJNA263496_P_NODE_5619_length_349_cov_1.350000_g5366_i0 PRJNA263496 5619 349 1.35 4.7115 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 361 4.819999999999999e-95   NTclustered gi|2700938653|ref|XM_063822279.1| 2820187 g5366 i0 85.387 55.9627507163324 349 50 99 1 1 348 465 813 PREDICTED: Bolinopsis microptera large ribosomal subunit protein uL2-like (LOC134814212), mRNA blastn 19531 361 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;