RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA263496" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1057256 1057256 PRJNA263496_P_NODE_19401_length_175_cov_2.269841_g19148_i0 PRJNA263496 19401 175 2.269841 3.97222175 Opisthokonta 33154 Fungi Fungi 324 2.83e-84   NTclustered gi|353078764|gb|JN651964.1| 76775 g19148 i0 100 100 175 0 100 0 1 175 582 408 Malassezia restricta strain NCCPF 127036 26S ribosomal RNA gene, partial sequence blastn 17500 324 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2332488 2332488 PRJNA263496_P_NODE_9942_length_250_cov_2.333333_g9689_i0 PRJNA263496 9942 250 2.333333 5.8333325 Malassezia 55193 Fungi Fungi 460 3.17e-125   NTclustered gi|1101565660|gb|KX839636.1| 55194 g9689 i0 100 99.6 249 0 99 0 2 250 250 2 Malassezia furfur isolate GDMUZJ2015102 26S ribosomal RNA gene, partial sequence blastn 24900 460 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
9297251 9297251 PRJNA263496_P_NODE_17428_length_186_cov_2.102190_g17175_i0 PRJNA263496 17428 186 2.10219 3.9100734 Malassezia restricta 76775 Fungi Fungi 117 5.56e-22   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g17175 i0 81.935 41.2956989247312 155 12 82 11 1 153 3169 3309 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 7681 117 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9297562 9297562 PRJNA263496_P_NODE_4788_length_385_cov_2.607143_g4535_i0 PRJNA263496 4788 385 2.607143 10.03750055 Malassezia restricta 76775 Fungi Fungi 701 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g4535 i0 99.482 89.2935064935065 386 1 100 1 1 385 2985 3370 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 34378 701 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10573334 10573334 PRJNA263496_P_NODE_21069_length_167_cov_0.864407_g20816_i0 PRJNA263496 21069 167 0.864407 1.44355969 Wallemia mellicola 1708541 Fungi Fungi 154 3.73e-33   NTclustered gi|588256351|ref|XM_006957290.1| 671144 g20816 i0 83.832 1 167 21 98 6 1 164 865 702 Wallemia mellicola CBS 633.66 DEAD-domain-containing protein mRNA blastn 167 154 1 Eukaryota Opisthokonta Fungi Basidiomycota Wallemiomycetes Wallemiales Wallemiaceae Wallemia Wallemia mellicola
20183296 20183296 PRJNA263496_P_NODE_24716_length_162_cov_0.902655_g24463_i0 PRJNA263496 24716 162 0.902655 1.4623011 Malassezia 55193 Fungi Fungi 300 4.36e-77   NTclustered gi|1321659599|gb|KY911093.1| 76775 g24463 i0 100 9.24691358024691 162 0 100 0 1 162 6369 6530 Malassezia restricta mitochondrion, complete genome blastn 1498 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;