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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA255848" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA255848 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1057010 1057010 PRJNA255848_P_NODE_34221_length_169_cov_1.275000_g33903_i0 PRJNA255848 34221 169 1.275 2.15475 Schistosoma 6181 Platyhelminthes Platyhelminthes 313 5.859999999999999e-81   NTclustered gi|28273285|gb|AY157173.1| 6183 g33903 i0 100 89.8934911242604 169 0 100 0 1 169 2051 1883 Schistosoma mansoni 28S large subunit ribosomal RNA gene, partial sequence blastn 15192 313 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
1643473 1643473 PRJNA255848_P_NODE_29182_length_184_cov_1.385185_g28864_i0 PRJNA255848 29182 184 1.3851850000000001 2.5487404 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 279 6.61e-71   NTclustered gi|3282532|gb|AF025674.1| 6183 g28864 i0 94.944 93.5869565217391 178 9 97 0 1 178 2797 2974 Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon containing an insertion of a SR2 subfamily B non-LTR retrotransposon blastn 17220 279 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
10572671 10572671 PRJNA255848_P_NODE_14889_length_259_cov_1.885714_g14571_i0 PRJNA255848 14889 259 1.885714 4.88399926 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 477 3.2799999999999986e-130   NTclustered gi|1084307458|ref|XR_001974607.1| 6183 g14571 i0 100 98.5868725868726 258 0 99 0 2 259 1441 1184 Schistosoma mansoni ribosomal RNA rRNA blastn 25534 477 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
15671463 15671463 PRJNA255848_P_NODE_35673_length_167_cov_0.864407_g35355_i0 PRJNA255848 35673 167 0.864407 1.44355969 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 296 5.86e-76   NTclustered gi|1084302595|ref|XM_018788890.1| 6183 g35355 i0 98.795 1.98802395209581 166 2 99 0 1 166 1078 1243 Schistosoma mansoni putative glutamate synthase partial mRNA blastn 332 296 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
15671526 15671526 PRJNA255848_P_NODE_47893_length_161_cov_0.910714_g47575_i0 PRJNA255848 47893 161 0.910714 1.46624954 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 298 1.56e-76   NTclustered gi|1084294336|ref|XM_018796014.1| 6183 g47575 i0 100 4.31055900621118 161 0 100 0 1 161 1648 1488 Schistosoma mansoni putative o-linked n-acetylglucosamine transferase, ogt partial mRNA blastn 694 298 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
16945923 16945923 PRJNA255848_P_NODE_13494_length_274_cov_2.408889_g13176_i0 PRJNA255848 13494 274 2.408889 6.60035586 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 507 4.47e-139   NTclustered gi|28273285|gb|AY157173.1| 6183 g13176 i0 100 96.6569343065693 274 0 100 0 1 274 2749 2476 Schistosoma mansoni 28S large subunit ribosomal RNA gene, partial sequence blastn 26484 507 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
16946021 16946021 PRJNA255848_P_NODE_39274_length_165_cov_0.879310_g38956_i0 PRJNA255848 39274 165 0.87931 1.4508615 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 119 1.34e-22   NTclustered gi|60598747|gb|AY810034.1| 6182 g38956 i0 90.11 1.55151515151515 91 9 55 0 75 165 101 11 Schistosoma japonicum SJCHGC06689 protein mRNA, partial cds blastn 256 119 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18220444 18220444 PRJNA255848_P_NODE_7895_length_379_cov_2.006061_g7577_i0 PRJNA255848 7895 379 2.006061 7.60297119 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 701 0   NTclustered gi|1495840396|gb|MK085970.1| 6183 g7577 i0 100 98.868073878628 379 0 100 0 1 379 466 844 Schistosoma mansoni voucher LVBI12FC1 large subunit ribosomal RNA gene, partial sequence blastn 37471 701 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
22733792 22733792 PRJNA255848_P_NODE_36838_length_166_cov_1.418803_g36520_i0 PRJNA255848 36838 166 1.418803 2.35521298 Schistosomatidae 31245 Platyhelminthes Platyhelminthes 307 2.69e-79   NTclustered gi|1805255|gb|U65657.1|SMU65657 6183 g36520 i0 100 100.006024096386 166 0 100 0 1 166 1802 1637 Schistosoma mansoni 18S ribosomal RNA gene, complete sequence blastn 16601 307 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
24008828 24008828 PRJNA255848_P_NODE_20239_length_221_cov_2.168605_g19921_i0 PRJNA255848 20239 221 2.168605 4.79261705 Schistosoma 6181 Platyhelminthes Platyhelminthes 409 1.0100000000000001e-109   NTclustered gi|28273285|gb|AY157173.1| 6183 g19921 i0 100 101.203619909502 221 0 100 0 1 221 1867 1647 Schistosoma mansoni 28S large subunit ribosomal RNA gene, partial sequence blastn 22366 409 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
24594890 24594890 PRJNA255848_P_NODE_34920_length_167_cov_1.296610_g34602_i0 PRJNA255848 34920 167 1.29661 2.1653387 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 309 7.53e-80   NTclustered gi|74325485|gb|DQ137574.1| 6183 g34602 i0 100 92.1796407185629 167 0 100 0 1 167 5 171 Schistosoma mansoni clone 153AAT microsatellite sequence blastn 15394 309 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
24594933 24594933 PRJNA255848_P_NODE_43880_length_163_cov_0.894737_g43562_i0 PRJNA255848 43880 163 0.894737 1.45842131 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 250 4.49e-62   NTclustered gi|1084302811|ref|XM_018789011.1| 6183 g43562 i0 98.582 5.57668711656442 141 2 87 0 1 141 160 20 Schistosoma mansoni pbs lyase heat-like protein partial mRNA blastn 909 250 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
25282893 25282893 PRJNA255848_P_NODE_11880_length_296_cov_1.230769_g11562_i0 PRJNA255848 11880 296 1.230769 3.64307624 Schistosoma 6181 Platyhelminthes Platyhelminthes 547 2.8799999999999986e-151   NTclustered gi|1495840396|gb|MK085970.1| 6183 g11562 i0 100 99.1587837837838 296 0 100 0 1 296 1193 898 Schistosoma mansoni voucher LVBI12FC1 large subunit ribosomal RNA gene, partial sequence blastn 29351 547 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
25282908 25282908 PRJNA255848_P_NODE_12800_length_283_cov_1.833333_g12482_i0 PRJNA255848 12800 283 1.833333 5.18833239 Schistosoma 6181 Platyhelminthes Platyhelminthes 523 4.5999999999999983e-144   NTclustered gi|2497639026|gb|OQ883999.1| 6183 g12482 i0 100 100.314487632509 283 0 100 0 1 283 512 794 Schistosoma mansoni isolate S4 small subunit ribosomal RNA gene, partial sequence blastn 28389 523 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;