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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA255848" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA255848 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
368616 368616 PRJNA255848_P_NODE_1761_length_846_cov_6.217064_g1531_i0 PRJNA255848 1761 846 6.217064 52.59636144 Pseudoloma neurophilia 146866 Fungi Fungi 1555 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g1531 i0 99.764 96.854609929078 846 2 100 0 1 846 859 14 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 81939 1555 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
2919425 2919425 PRJNA255848_P_NODE_6243_length_438_cov_3.969152_g5925_i0 PRJNA255848 6243 438 3.969152 17.38488576 Pseudoloma neurophilia 146866 Fungi Fungi 809 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g5925 i0 100 90.5707762557078 438 0 100 0 1 438 1316 879 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 39670 809 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
14397790 14397790 PRJNA255848_P_NODE_472_length_1456_cov_3.720682_g368_i0 PRJNA255848 472 1456 3.720682 54.17312992 Pleistophora mulleri 249366 Fungi Fungi 1472 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g368 i0 85.195 25.3289835164835 1486 158 99 54 1 1445 3090 1626 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 36879 1472 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
19494532 19494532 PRJNA255848_P_NODE_16936_length_242_cov_2.927461_g16618_i0 PRJNA255848 16936 242 2.927461 7.08445562 Pseudoloma neurophilia 146866 Fungi Fungi 442 1.1099999999999995e-119   NTclustered gi|11993647|gb|AF322654.1| 146866 g16618 i0 99.588 85.2396694214876 243 0 100 1 1 242 1520 1762 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20628 442 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;